Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 AC116050.2-201ENST00000612102 1779 ntBASIC18.37■□□□□ 0.53
RTL6Q6ICC9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 AC073648.6-201ENST00000641589 218 ntBASIC18.37■□□□□ 0.53
RTL6Q6ICC9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL6Q6ICC9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL6Q6ICC9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL6Q6ICC9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.36■□□□□ 0.53
RTL6Q6ICC9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
RTL6Q6ICC9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.36■□□□□ 0.53
RTL6Q6ICC9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.36■□□□□ 0.53
RTL6Q6ICC9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTL6Q6ICC9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.36■□□□□ 0.53
RTL6Q6ICC9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTL6Q6ICC9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL6Q6ICC9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL6Q6ICC9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 AC142381.4-202ENST00000563973 229 ntBASIC18.35■□□□□ 0.53
RTL6Q6ICC9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.35■□□□□ 0.53
RTL6Q6ICC9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 AL158047.1-201ENST00000445918 881 ntBASIC18.34■□□□□ 0.53
RTL6Q6ICC9 PNMA6B-201ENST00000538162 1200 ntBASIC18.34■□□□□ 0.53
RTL6Q6ICC9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTL6Q6ICC9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTL6Q6ICC9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTL6Q6ICC9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.33■□□□□ 0.53
RTL6Q6ICC9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTL6Q6ICC9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.33■□□□□ 0.53
RTL6Q6ICC9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTL6Q6ICC9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTL6Q6ICC9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTL6Q6ICC9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.33■□□□□ 0.53
RTL6Q6ICC9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTL6Q6ICC9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.33■□□□□ 0.53
RTL6Q6ICC9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.33■□□□□ 0.53
RTL6Q6ICC9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RTL6Q6ICC9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL6Q6ICC9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTL6Q6ICC9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.33■□□□□ 0.52
RTL6Q6ICC9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL6Q6ICC9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL6Q6ICC9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.33■□□□□ 0.52
RTL6Q6ICC9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL6Q6ICC9 AC105020.6-201ENST00000621523 1217 ntBASIC18.33■□□□□ 0.52
RTL6Q6ICC9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.33■□□□□ 0.52
RTL6Q6ICC9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RTL6Q6ICC9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms