Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 BX005040.4-201ENST00000637145 1518 ntBASIC19.19■□□□□ 0.66
LPCAT4Q643R3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 AC012354.3-201ENST00000623734 483 ntBASIC19.18■□□□□ 0.66
LPCAT4Q643R3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LPCAT4Q643R3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 AC011484.1-201ENST00000377652 1995 ntBASIC19.17■□□□□ 0.66
LPCAT4Q643R3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LPCAT4Q643R3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 YBX1P4-201ENST00000392794 808 ntBASIC19.16■□□□□ 0.66
LPCAT4Q643R3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 AC241377.3-202ENST00000626088 1088 ntBASIC19.16■□□□□ 0.66
LPCAT4Q643R3 AC241585.3-202ENST00000628937 1088 ntBASIC19.16■□□□□ 0.66
LPCAT4Q643R3 AC245100.8-202ENST00000629247 1058 ntBASIC19.16■□□□□ 0.66
LPCAT4Q643R3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.16■□□□□ 0.66
LPCAT4Q643R3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LPCAT4Q643R3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT4Q643R3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT4Q643R3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT4Q643R3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT4Q643R3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.15■□□□□ 0.66
LPCAT4Q643R3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LPCAT4Q643R3 OR2I1P-207ENST00000453522 948 ntBASIC19.15■□□□□ 0.66
LPCAT4Q643R3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.15■□□□□ 0.66
LPCAT4Q643R3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT4Q643R3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT4Q643R3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LPCAT4Q643R3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LPCAT4Q643R3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.15■□□□□ 0.66
LPCAT4Q643R3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT4Q643R3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
LPCAT4Q643R3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LPCAT4Q643R3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LPCAT4Q643R3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
LPCAT4Q643R3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LPCAT4Q643R3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms