Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC13.83□□□□□ -0.19
VPS13DQ5THJ4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
VPS13DQ5THJ4 ARMC10P1-201ENST00000313754 855 ntBASIC13.83□□□□□ -0.19
VPS13DQ5THJ4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
VPS13DQ5THJ4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.83□□□□□ -0.19
VPS13DQ5THJ4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.83□□□□□ -0.19
VPS13DQ5THJ4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.83□□□□□ -0.19
VPS13DQ5THJ4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.83□□□□□ -0.19
VPS13DQ5THJ4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.83□□□□□ -0.19
VPS13DQ5THJ4 AP001412.1-201ENST00000608405 714 ntBASIC13.83□□□□□ -0.19
VPS13DQ5THJ4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
VPS13DQ5THJ4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
VPS13DQ5THJ4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VPS13DQ5THJ4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 AC073508.3-201ENST00000619697 1419 ntBASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 KRT16P5-201ENST00000455284 522 ntBASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS13DQ5THJ4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 AC079598.2-202ENST00000546624 1451 ntBASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 AC073195.1-201ENST00000607241 877 ntBASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.82□□□□□ -0.2
VPS13DQ5THJ4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 RBM17P1-201ENST00000453646 1190 ntBASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 NUDT16P1-203ENST00000513809 620 ntBASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms