Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
UBR4Q5T4S7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBR4Q5T4S7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBR4Q5T4S7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 SLC25A1P1-201ENST00000528351 927 ntBASIC11.29□□□□□ -0.6
UBR4Q5T4S7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 AC140113.2-201ENST00000604370 208 ntBASIC11.29□□□□□ -0.6
UBR4Q5T4S7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 AL606495.2-201ENST00000605867 535 ntBASIC11.29□□□□□ -0.6
UBR4Q5T4S7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 KRT18P68-201ENST00000392293 1000 ntBASIC11.29□□□□□ -0.6
UBR4Q5T4S7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 FAM8A3P-201ENST00000427218 844 ntBASIC11.29□□□□□ -0.6
UBR4Q5T4S7 MIR3652-201ENST00000579335 131 ntBASIC11.29□□□□□ -0.6
UBR4Q5T4S7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 AL691403.2-201ENST00000618460 490 ntBASIC11.29□□□□□ -0.6
UBR4Q5T4S7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBR4Q5T4S7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 AC055717.3-201ENST00000622967 595 ntBASIC11.28□□□□□ -0.6
UBR4Q5T4S7 AF228730.7-201ENST00000641842 219 ntBASIC11.28□□□□□ -0.6
UBR4Q5T4S7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC11.28□□□□□ -0.6
UBR4Q5T4S7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBR4Q5T4S7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC11.27□□□□□ -0.6
UBR4Q5T4S7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
UBR4Q5T4S7 AC005104.2-201ENST00000427818 678 ntBASIC11.27□□□□□ -0.6
UBR4Q5T4S7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBR4Q5T4S7 F2R-202ENST00000505600 442 ntTSL 2 BASIC11.27□□□□□ -0.6
UBR4Q5T4S7 AC106795.1-205ENST00000512851 1056 ntBASIC11.27□□□□□ -0.6
UBR4Q5T4S7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC11.27□□□□□ -0.6
UBR4Q5T4S7 AC084346.2-201ENST00000607097 949 ntBASIC11.27□□□□□ -0.6
UBR4Q5T4S7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC11.27□□□□□ -0.6
UBR4Q5T4S7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBR4Q5T4S7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
UBR4Q5T4S7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 BX640515.1-201ENST00000617215 977 ntBASIC11.27□□□□□ -0.61
UBR4Q5T4S7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBR4Q5T4S7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 PRSS44-201ENST00000515154 1146 ntBASIC11.26□□□□□ -0.61
UBR4Q5T4S7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 MRPL3P1-201ENST00000400109 1033 ntBASIC11.26□□□□□ -0.61
UBR4Q5T4S7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms