Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
KHDC1Q4VXA5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.58■□□□□ 0.88
KHDC1Q4VXA5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.58■□□□□ 0.88
KHDC1Q4VXA5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
KHDC1Q4VXA5 AL020996.1-203ENST00000536896 2307 ntBASIC20.58■□□□□ 0.88
KHDC1Q4VXA5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 AL050303.2-201ENST00000619798 666 ntBASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 AC013268.1-206ENST00000638368 961 ntBASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 AC112229.1-201ENST00000639295 961 ntBASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KHDC1Q4VXA5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 AC091799.1-201ENST00000422823 811 ntBASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 AC245052.3-201ENST00000450182 901 ntBASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 AC231657.2-201ENST00000624556 255 ntBASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
KHDC1Q4VXA5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 AC007322.1-201ENST00000426983 750 ntBASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KHDC1Q4VXA5 AC068338.2-201ENST00000563278 1430 ntBASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 MIR663A-201ENST00000385250 93 ntBASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 AC007322.4-201ENST00000509611 723 ntBASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
KHDC1Q4VXA5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms