Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDS5AQ29RF7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PDS5AQ29RF7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PDS5AQ29RF7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDS5AQ29RF7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
PDS5AQ29RF7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.56■■□□□ 1.52
PDS5AQ29RF7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC24.56■■□□□ 1.52
PDS5AQ29RF7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PDS5AQ29RF7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
PDS5AQ29RF7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC24.56■■□□□ 1.52
PDS5AQ29RF7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PDS5AQ29RF7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PDS5AQ29RF7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PDS5AQ29RF7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PDS5AQ29RF7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC24.56■■□□□ 1.52
PDS5AQ29RF7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
PDS5AQ29RF7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC24.56■■□□□ 1.52
PDS5AQ29RF7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PDS5AQ29RF7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PDS5AQ29RF7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.55■■□□□ 1.52
PDS5AQ29RF7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
PDS5AQ29RF7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PDS5AQ29RF7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
PDS5AQ29RF7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
PDS5AQ29RF7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PDS5AQ29RF7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
PDS5AQ29RF7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
PDS5AQ29RF7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC24.55■■□□□ 1.52
PDS5AQ29RF7 RER1-204ENST00000378518 522 ntTSL 3 BASIC24.55■■□□□ 1.52
PDS5AQ29RF7 AC120498.8-201ENST00000614275 531 ntBASIC24.55■■□□□ 1.52
PDS5AQ29RF7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC24.55■■□□□ 1.52
PDS5AQ29RF7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PDS5AQ29RF7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.55■■□□□ 1.52
PDS5AQ29RF7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC24.54■■□□□ 1.52
PDS5AQ29RF7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC24.54■■□□□ 1.52
PDS5AQ29RF7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.54■■□□□ 1.52
PDS5AQ29RF7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PDS5AQ29RF7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PDS5AQ29RF7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PDS5AQ29RF7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PDS5AQ29RF7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.54■■□□□ 1.52
PDS5AQ29RF7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.54■■□□□ 1.52
PDS5AQ29RF7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
PDS5AQ29RF7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC24.54■■□□□ 1.52
PDS5AQ29RF7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PDS5AQ29RF7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 AL158047.1-201ENST00000445918 881 ntBASIC24.53■■□□□ 1.52
PDS5AQ29RF7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.53■■□□□ 1.52
PDS5AQ29RF7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDS5AQ29RF7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDS5AQ29RF7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDS5AQ29RF7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.52■■□□□ 1.52
PDS5AQ29RF7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
PDS5AQ29RF7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PDS5AQ29RF7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDS5AQ29RF7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDS5AQ29RF7 AL390719.1-204ENST00000412397 1219 ntBASIC24.52■■□□□ 1.52
PDS5AQ29RF7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC24.52■■□□□ 1.52
PDS5AQ29RF7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDS5AQ29RF7 AP006294.2-201ENST00000641667 209 ntBASIC24.52■■□□□ 1.52
PDS5AQ29RF7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDS5AQ29RF7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC24.52■■□□□ 1.52
PDS5AQ29RF7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PDS5AQ29RF7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDS5AQ29RF7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 RPPH1-201ENST00000516869 333 ntBASIC24.51■■□□□ 1.51
PDS5AQ29RF7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 MTDHP1-201ENST00000605323 784 ntBASIC24.51■■□□□ 1.51
PDS5AQ29RF7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDS5AQ29RF7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
PDS5AQ29RF7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms