Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAE1P78406 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAE1P78406 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAE1P78406 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAE1P78406 PCDHAC2-203ENST00000615316 3011 ntBASIC19.37■□□□□ 0.69
RAE1P78406 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAE1P78406 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.37■□□□□ 0.69
RAE1P78406 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.37■□□□□ 0.69
RAE1P78406 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.37■□□□□ 0.69
RAE1P78406 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.36■□□□□ 0.69
RAE1P78406 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAE1P78406 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAE1P78406 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAE1P78406 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAE1P78406 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAE1P78406 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.36■□□□□ 0.69
RAE1P78406 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAE1P78406 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAE1P78406 AC011767.1-201ENST00000617410 1153 ntBASIC19.36■□□□□ 0.69
RAE1P78406 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.36■□□□□ 0.69
RAE1P78406 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.36■□□□□ 0.69
RAE1P78406 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAE1P78406 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.36■□□□□ 0.69
RAE1P78406 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAE1P78406 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAE1P78406 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAE1P78406 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAE1P78406 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
RAE1P78406 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAE1P78406 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.35■□□□□ 0.69
RAE1P78406 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAE1P78406 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAE1P78406 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RAE1P78406 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAE1P78406 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAE1P78406 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.35■□□□□ 0.69
RAE1P78406 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RAE1P78406 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAE1P78406 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAE1P78406 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.35■□□□□ 0.69
RAE1P78406 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.35■□□□□ 0.69
RAE1P78406 AL162412.1-201ENST00000567129 965 ntBASIC19.35■□□□□ 0.69
RAE1P78406 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAE1P78406 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.35■□□□□ 0.69
RAE1P78406 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAE1P78406 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RAE1P78406 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAE1P78406 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAE1P78406 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.35■□□□□ 0.69
RAE1P78406 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAE1P78406 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.34■□□□□ 0.69
RAE1P78406 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.34■□□□□ 0.69
RAE1P78406 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAE1P78406 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAE1P78406 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.34■□□□□ 0.69
RAE1P78406 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RAE1P78406 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAE1P78406 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RAE1P78406 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAE1P78406 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAE1P78406 AC016769.1-201ENST00000409132 1010 ntBASIC19.34■□□□□ 0.69
RAE1P78406 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAE1P78406 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.34■□□□□ 0.69
RAE1P78406 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.34■□□□□ 0.69
RAE1P78406 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.34■□□□□ 0.69
RAE1P78406 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.34■□□□□ 0.69
RAE1P78406 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RAE1P78406 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.34■□□□□ 0.69
RAE1P78406 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAE1P78406 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAE1P78406 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RAE1P78406 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.34■□□□□ 0.69
RAE1P78406 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAE1P78406 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAE1P78406 CYP21A1P-202ENST00000354927 1481 ntBASIC19.34■□□□□ 0.69
RAE1P78406 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RAE1P78406 AC087633.2-202ENST00000565166 1439 ntBASIC19.34■□□□□ 0.69
RAE1P78406 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
RAE1P78406 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAE1P78406 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAE1P78406 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
RAE1P78406 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAE1P78406 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.33■□□□□ 0.68
RAE1P78406 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.33■□□□□ 0.68
RAE1P78406 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.33■□□□□ 0.68
RAE1P78406 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAE1P78406 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAE1P78406 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.33■□□□□ 0.68
RAE1P78406 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RAE1P78406 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.33■□□□□ 0.68
RAE1P78406 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
RAE1P78406 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
RAE1P78406 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAE1P78406 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RAE1P78406 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.32■□□□□ 0.68
RAE1P78406 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAE1P78406 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RAE1P78406 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAE1P78406 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAE1P78406 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms