Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CXCR4P61073 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.54■□□□□ 0.56
CXCR4P61073 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CXCR4P61073 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CXCR4P61073 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CXCR4P61073 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CXCR4P61073 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.53■□□□□ 0.56
CXCR4P61073 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CXCR4P61073 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CXCR4P61073 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CXCR4P61073 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CXCR4P61073 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CXCR4P61073 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CXCR4P61073 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.53■□□□□ 0.56
CXCR4P61073 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.53■□□□□ 0.56
CXCR4P61073 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.53■□□□□ 0.56
CXCR4P61073 MIR4767-201ENST00000582827 78 ntBASIC18.53■□□□□ 0.56
CXCR4P61073 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.53■□□□□ 0.56
CXCR4P61073 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CXCR4P61073 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CXCR4P61073 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CXCR4P61073 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CXCR4P61073 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.53■□□□□ 0.56
CXCR4P61073 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.53■□□□□ 0.56
CXCR4P61073 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CXCR4P61073 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CXCR4P61073 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CXCR4P61073 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.53■□□□□ 0.56
CXCR4P61073 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.53■□□□□ 0.56
CXCR4P61073 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXCR4P61073 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.52■□□□□ 0.56
CXCR4P61073 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
CXCR4P61073 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXCR4P61073 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CXCR4P61073 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.52■□□□□ 0.56
CXCR4P61073 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXCR4P61073 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXCR4P61073 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXCR4P61073 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXCR4P61073 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXCR4P61073 AL136116.3-201ENST00000402907 1138 ntBASIC18.52■□□□□ 0.56
CXCR4P61073 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CXCR4P61073 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.52■□□□□ 0.56
CXCR4P61073 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CXCR4P61073 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.52■□□□□ 0.56
CXCR4P61073 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXCR4P61073 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
CXCR4P61073 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.52■□□□□ 0.55
CXCR4P61073 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CXCR4P61073 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CXCR4P61073 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CXCR4P61073 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CXCR4P61073 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CXCR4P61073 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CXCR4P61073 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CXCR4P61073 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.51■□□□□ 0.55
CXCR4P61073 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
CXCR4P61073 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CXCR4P61073 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CXCR4P61073 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CXCR4P61073 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.51■□□□□ 0.55
CXCR4P61073 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.51■□□□□ 0.55
CXCR4P61073 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CXCR4P61073 AC126544.1-201ENST00000580842 1059 ntBASIC18.51■□□□□ 0.55
CXCR4P61073 AC233992.3-201ENST00000607491 485 ntBASIC18.51■□□□□ 0.55
CXCR4P61073 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CXCR4P61073 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CXCR4P61073 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.51■□□□□ 0.55
CXCR4P61073 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CXCR4P61073 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CXCR4P61073 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXCR4P61073 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.5■□□□□ 0.55
CXCR4P61073 AC009237.3-201ENST00000393279 1427 ntBASIC18.5■□□□□ 0.55
CXCR4P61073 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXCR4P61073 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXCR4P61073 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXCR4P61073 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXCR4P61073 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXCR4P61073 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CXCR4P61073 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.5■□□□□ 0.55
CXCR4P61073 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CXCR4P61073 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXCR4P61073 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.5■□□□□ 0.55
CXCR4P61073 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXCR4P61073 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXCR4P61073 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXCR4P61073 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXCR4P61073 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.5■□□□□ 0.55
CXCR4P61073 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CXCR4P61073 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CXCR4P61073 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CXCR4P61073 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.5■□□□□ 0.55
CXCR4P61073 AC093484.2-201ENST00000580996 2166 ntBASIC18.49■□□□□ 0.55
CXCR4P61073 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms