Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL356652.1-201ENST00000615962 565 ntBASIC19.49■□□□□ 0.71
VSX2P58304 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VSX2P58304 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.49■□□□□ 0.71
VSX2P58304 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VSX2P58304 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VSX2P58304 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
VSX2P58304 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
VSX2P58304 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VSX2P58304 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
VSX2P58304 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.48■□□□□ 0.71
VSX2P58304 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.48■□□□□ 0.71
VSX2P58304 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VSX2P58304 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VSX2P58304 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VSX2P58304 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VSX2P58304 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.48■□□□□ 0.71
VSX2P58304 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.48■□□□□ 0.71
VSX2P58304 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VSX2P58304 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VSX2P58304 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VSX2P58304 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VSX2P58304 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.48■□□□□ 0.71
VSX2P58304 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
VSX2P58304 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VSX2P58304 KRT18P6-201ENST00000555540 1265 ntBASIC19.48■□□□□ 0.71
VSX2P58304 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VSX2P58304 MYC-209ENST00000641252 345 ntBASIC19.48■□□□□ 0.71
VSX2P58304 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
VSX2P58304 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VSX2P58304 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
VSX2P58304 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VSX2P58304 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VSX2P58304 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VSX2P58304 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.48■□□□□ 0.71
VSX2P58304 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VSX2P58304 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VSX2P58304 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
VSX2P58304 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VSX2P58304 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.47■□□□□ 0.71
VSX2P58304 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
VSX2P58304 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.47■□□□□ 0.71
VSX2P58304 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VSX2P58304 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
VSX2P58304 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VSX2P58304 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VSX2P58304 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VSX2P58304 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VSX2P58304 AC083880.1-201ENST00000608266 535 ntBASIC19.47■□□□□ 0.71
VSX2P58304 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
VSX2P58304 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.47■□□□□ 0.71
VSX2P58304 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VSX2P58304 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
VSX2P58304 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VSX2P58304 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VSX2P58304 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VSX2P58304 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VSX2P58304 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VSX2P58304 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VSX2P58304 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VSX2P58304 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.46■□□□□ 0.71
VSX2P58304 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VSX2P58304 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VSX2P58304 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.46■□□□□ 0.71
VSX2P58304 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VSX2P58304 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VSX2P58304 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VSX2P58304 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.46■□□□□ 0.71
VSX2P58304 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VSX2P58304 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VSX2P58304 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VSX2P58304 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VSX2P58304 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VSX2P58304 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
VSX2P58304 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
VSX2P58304 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
VSX2P58304 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VSX2P58304 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VSX2P58304 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
VSX2P58304 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VSX2P58304 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VSX2P58304 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.45■□□□□ 0.7
VSX2P58304 CD99P1-205ENST00000527459 561 ntBASIC19.45■□□□□ 0.7
VSX2P58304 MIR2861-201ENST00000636310 90 ntBASIC19.45■□□□□ 0.7
VSX2P58304 AC006128.1-201ENST00000624704 1661 ntBASIC19.45■□□□□ 0.7
VSX2P58304 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VSX2P58304 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
VSX2P58304 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VSX2P58304 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VSX2P58304 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.44■□□□□ 0.7
VSX2P58304 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VSX2P58304 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.44■□□□□ 0.7
VSX2P58304 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VSX2P58304 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VSX2P58304 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VSX2P58304 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VSX2P58304 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.44■□□□□ 0.7
VSX2P58304 RNA5SP413-201ENST00000516373 109 ntBASIC19.44■□□□□ 0.7
VSX2P58304 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.44■□□□□ 0.7
VSX2P58304 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.44■□□□□ 0.7
VSX2P58304 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms