Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.22■□□□□ 0.67
NR1H2P55055 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NR1H2P55055 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NR1H2P55055 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NR1H2P55055 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.22■□□□□ 0.67
NR1H2P55055 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NR1H2P55055 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NR1H2P55055 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H2P55055 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H2P55055 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H2P55055 AC123595.1-201ENST00000440769 1046 ntBASIC19.21■□□□□ 0.67
NR1H2P55055 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H2P55055 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H2P55055 AP005435.1-201ENST00000529293 1178 ntBASIC19.21■□□□□ 0.67
NR1H2P55055 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.21■□□□□ 0.67
NR1H2P55055 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
NR1H2P55055 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H2P55055 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H2P55055 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.21■□□□□ 0.67
NR1H2P55055 AC099778.1-201ENST00000568593 1911 ntBASIC19.21■□□□□ 0.67
NR1H2P55055 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H2P55055 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H2P55055 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NR1H2P55055 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.21■□□□□ 0.67
NR1H2P55055 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.21■□□□□ 0.66
NR1H2P55055 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H2P55055 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H2P55055 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NR1H2P55055 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NR1H2P55055 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H2P55055 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.2■□□□□ 0.66
NR1H2P55055 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H2P55055 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H2P55055 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.2■□□□□ 0.66
NR1H2P55055 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H2P55055 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.2■□□□□ 0.66
NR1H2P55055 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H2P55055 AC012414.1-201ENST00000556676 535 ntBASIC19.2■□□□□ 0.66
NR1H2P55055 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H2P55055 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H2P55055 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NR1H2P55055 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H2P55055 AL512408.1-201ENST00000569378 2000 ntBASIC19.2■□□□□ 0.66
NR1H2P55055 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H2P55055 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.2■□□□□ 0.66
NR1H2P55055 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NR1H2P55055 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NR1H2P55055 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NR1H2P55055 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H2P55055 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.19■□□□□ 0.66
NR1H2P55055 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H2P55055 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H2P55055 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.19■□□□□ 0.66
NR1H2P55055 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.19■□□□□ 0.66
NR1H2P55055 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
NR1H2P55055 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.19■□□□□ 0.66
NR1H2P55055 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NR1H2P55055 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.19■□□□□ 0.66
NR1H2P55055 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NR1H2P55055 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
NR1H2P55055 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H2P55055 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H2P55055 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NR1H2P55055 AC004687.1-201ENST00000579003 1625 ntBASIC19.18■□□□□ 0.66
NR1H2P55055 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NR1H2P55055 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.18■□□□□ 0.66
NR1H2P55055 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
NR1H2P55055 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H2P55055 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.18■□□□□ 0.66
NR1H2P55055 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.18■□□□□ 0.66
NR1H2P55055 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H2P55055 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H2P55055 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H2P55055 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NR1H2P55055 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.18■□□□□ 0.66
NR1H2P55055 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H2P55055 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H2P55055 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H2P55055 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
NR1H2P55055 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.17■□□□□ 0.66
NR1H2P55055 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.17■□□□□ 0.66
NR1H2P55055 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.17■□□□□ 0.66
NR1H2P55055 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NR1H2P55055 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.17■□□□□ 0.66
NR1H2P55055 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms