Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC29.41■■■□□ 2.3
CLTCL1P53675 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC29.41■■■□□ 2.3
CLTCL1P53675 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CLTCL1P53675 TK2-204ENST00000525974 1178 ntTSL 2 BASIC29.41■■■□□ 2.3
CLTCL1P53675 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
CLTCL1P53675 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC29.41■■■□□ 2.3
CLTCL1P53675 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CLTCL1P53675 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC29.4■■■□□ 2.3
CLTCL1P53675 KRT8P36-201ENST00000489121 1440 ntBASIC29.4■■■□□ 2.3
CLTCL1P53675 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC29.4■■■□□ 2.3
CLTCL1P53675 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
CLTCL1P53675 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
CLTCL1P53675 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC29.4■■■□□ 2.3
CLTCL1P53675 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC29.4■■■□□ 2.3
CLTCL1P53675 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CLTCL1P53675 AC124283.5-201ENST00000624661 1809 ntBASIC29.4■■■□□ 2.3
CLTCL1P53675 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CLTCL1P53675 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CLTCL1P53675 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CLTCL1P53675 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC29.4■■■□□ 2.3
CLTCL1P53675 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CLTCL1P53675 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CLTCL1P53675 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CLTCL1P53675 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CLTCL1P53675 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
CLTCL1P53675 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC29.39■■■□□ 2.3
CLTCL1P53675 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC29.39■■■□□ 2.3
CLTCL1P53675 RPS20-210ENST00000523936 899 ntTSL 2 BASIC29.39■■■□□ 2.3
CLTCL1P53675 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC29.39■■■□□ 2.3
CLTCL1P53675 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC29.39■■■□□ 2.3
CLTCL1P53675 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC29.39■■■□□ 2.3
CLTCL1P53675 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
CLTCL1P53675 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC29.39■■■□□ 2.29
CLTCL1P53675 AC027702.1-201ENST00000563810 1770 ntBASIC29.39■■■□□ 2.29
CLTCL1P53675 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CLTCL1P53675 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC29.38■■■□□ 2.29
CLTCL1P53675 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
CLTCL1P53675 AL355075.4-201ENST00000554988 638 ntBASIC29.38■■■□□ 2.29
CLTCL1P53675 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC29.38■■■□□ 2.29
CLTCL1P53675 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
CLTCL1P53675 STK25-205ENST00000405883 1904 ntTSL 2 BASIC29.38■■■□□ 2.29
CLTCL1P53675 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CLTCL1P53675 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CLTCL1P53675 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CLTCL1P53675 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC29.38■■■□□ 2.29
CLTCL1P53675 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
CLTCL1P53675 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC29.38■■■□□ 2.29
CLTCL1P53675 AC110285.5-201ENST00000611501 352 ntBASIC29.38■■■□□ 2.29
CLTCL1P53675 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CLTCL1P53675 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC29.37■■■□□ 2.29
CLTCL1P53675 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CLTCL1P53675 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC29.37■■■□□ 2.29
CLTCL1P53675 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CLTCL1P53675 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CLTCL1P53675 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC29.37■■■□□ 2.29
CLTCL1P53675 BX088651.1-201ENST00000540551 451 ntBASIC29.37■■■□□ 2.29
CLTCL1P53675 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CLTCL1P53675 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
CLTCL1P53675 PTBP1P-201ENST00000554374 1601 ntBASIC29.37■■■□□ 2.29
CLTCL1P53675 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC29.36■■■□□ 2.29
CLTCL1P53675 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC29.36■■■□□ 2.29
CLTCL1P53675 AL024507.2-201ENST00000606070 2574 ntBASIC29.36■■■□□ 2.29
CLTCL1P53675 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
CLTCL1P53675 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CLTCL1P53675 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CLTCL1P53675 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
CLTCL1P53675 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC29.36■■■□□ 2.29
CLTCL1P53675 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CLTCL1P53675 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
CLTCL1P53675 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
CLTCL1P53675 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC29.35■■■□□ 2.29
CLTCL1P53675 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC29.35■■■□□ 2.29
CLTCL1P53675 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CLTCL1P53675 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CLTCL1P53675 STAC-204ENST00000457375 1366 ntTSL 2 BASIC29.35■■■□□ 2.29
CLTCL1P53675 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC29.35■■■□□ 2.29
CLTCL1P53675 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC29.35■■■□□ 2.29
CLTCL1P53675 AL117328.2-201ENST00000624617 1940 ntBASIC29.35■■■□□ 2.29
CLTCL1P53675 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CLTCL1P53675 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC29.34■■■□□ 2.29
CLTCL1P53675 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
CLTCL1P53675 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CLTCL1P53675 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
CLTCL1P53675 AL390719.1-204ENST00000412397 1219 ntBASIC29.34■■■□□ 2.29
CLTCL1P53675 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC29.34■■■□□ 2.29
CLTCL1P53675 RARRES2P10-201ENST00000564312 460 ntBASIC29.34■■■□□ 2.29
CLTCL1P53675 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
CLTCL1P53675 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC29.34■■■□□ 2.29
CLTCL1P53675 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
CLTCL1P53675 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
CLTCL1P53675 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC29.34■■■□□ 2.29
CLTCL1P53675 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CLTCL1P53675 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC29.34■■■□□ 2.29
CLTCL1P53675 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC29.33■■■□□ 2.29
CLTCL1P53675 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC29.33■■■□□ 2.29
CLTCL1P53675 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CLTCL1P53675 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
CLTCL1P53675 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC29.33■■■□□ 2.29
CLTCL1P53675 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
CLTCL1P53675 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms