Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 AFI1YOR129C 2682 nt2.16□□□□□ -2.06
RPT4P53549 NAN1YPL126W 2691 nt2.16□□□□□ -2.06
RPT4P53549 FAB1YFR019W 6837 nt2.16□□□□□ -2.06
RPT4P53549 MPH1YIR002C 2982 nt2.16□□□□□ -2.06
RPT4P53549 YJL181WYJL181W 1836 nt2.15□□□□□ -2.06
RPT4P53549 MZM1YDR493W 372 nt2.15□□□□□ -2.07
RPT4P53549 YHR180W-AYHR180W-A 183 nt2.15□□□□□ -2.07
RPT4P53549 DIS3YOL021C 3006 nt2.15□□□□□ -2.07
RPT4P53549 SCH9YHR205W 2475 nt2.14□□□□□ -2.07
RPT4P53549 TOR2YKL203C 7425 nt2.14□□□□□ -2.07
RPT4P53549 CDC50YCR094W 1176 nt2.14□□□□□ -2.07
RPT4P53549 SNC1YAL030W 354 nt2.14□□□□□ -2.07
RPT4P53549 YKL111CYKL111C 336 nt2.14□□□□□ -2.07
RPT4P53549 DAD3YBR233W-A 285 nt2.14□□□□□ -2.07
RPT4P53549 Q0017Q0017 162 nt2.14□□□□□ -2.07
RPT4P53549 BFA1YJR053W 1725 nt2.14□□□□□ -2.07
RPT4P53549 RPL9AYGL147C 576 nt2.13□□□□□ -2.07
RPT4P53549 NOP10YHR072W-A 177 nt2.13□□□□□ -2.07
RPT4P53549 YKL068W-AYKL068W-A 237 nt2.13□□□□□ -2.07
RPT4P53549 YNL010WYNL010W 726 nt2.13□□□□□ -2.07
RPT4P53549 RGA1YOR127W 3024 nt2.13□□□□□ -2.07
RPT4P53549 COS111YBR203W 2775 nt2.13□□□□□ -2.07
RPT4P53549 NUP82YJL061W 2142 nt2.12□□□□□ -2.07
RPT4P53549 IPT1YDR072C 1584 nt2.12□□□□□ -2.07
RPT4P53549 SPE1YKL184W 1401 nt2.12□□□□□ -2.07
RPT4P53549 YDL068WYDL068W 330 nt2.12□□□□□ -2.07
RPT4P53549 YEL018C-AYEL018C-A 534 nt2.12□□□□□ -2.07
RPT4P53549 YPS5YGL259W 498 nt2.12□□□□□ -2.07
RPT4P53549 YGR290WYGR290W 444 nt2.12□□□□□ -2.07
RPT4P53549 YJR140W-AYJR140W-A 150 nt2.12□□□□□ -2.07
RPT4P53549 PKR1YMR123W 369 nt2.12□□□□□ -2.07
RPT4P53549 IRC16YPR038W 360 nt2.12□□□□□ -2.07
RPT4P53549 USO1YDL058W 5373 nt2.11□□□□□ -2.07
RPT4P53549 MTC7YEL033W 420 nt2.11□□□□□ -2.07
RPT4P53549 SMB1YER029C 591 nt2.11□□□□□ -2.07
RPT4P53549 YHL037CYHL037C 402 nt2.11□□□□□ -2.07
RPT4P53549 GPI15YNL038W 690 nt2.11□□□□□ -2.07
RPT4P53549 YOL013W-BYOL013W-B 291 nt2.11□□□□□ -2.07
RPT4P53549 NEO1YIL048W 3456 nt2.11□□□□□ -2.07
RPT4P53549 YHR214C-CYHR214C-C 1437 nt2.1□□□□□ -2.07
RPT4P53549 MET18YIL128W 3099 nt2.1□□□□□ -2.07
RPT4P53549 YJR079WYJR079W 330 nt2.1□□□□□ -2.07
RPT4P53549 YNL122CYNL122C 348 nt2.1□□□□□ -2.07
RPT4P53549 RPB5YBR154C 648 nt2.1□□□□□ -2.07
RPT4P53549 TRM3YDL112W 4311 nt2.1□□□□□ -2.07
RPT4P53549 NIC96YFR002W 2520 nt2.1□□□□□ -2.07
RPT4P53549 CTF4YPR135W 2784 nt2.09□□□□□ -2.07
RPT4P53549 SMD1YGR074W 441 nt2.09□□□□□ -2.07
RPT4P53549 YAP3YHL009C 993 nt2.09□□□□□ -2.07
RPT4P53549 tT(UGU)Q1tT(UGU)Q1 76 nt2.09□□□□□ -2.07
RPT4P53549 RPL16AYIL133C 600 nt2.09□□□□□ -2.07
RPT4P53549 MSL1YIR009W 336 nt2.09□□□□□ -2.07
RPT4P53549 NCE101YJL205C 162 nt2.09□□□□□ -2.07
RPT4P53549 GRX8YLR364W 330 nt2.09□□□□□ -2.07
RPT4P53549 YOR333CYOR333C 417 nt2.09□□□□□ -2.07
RPT4P53549 TRL1YJL087C 2484 nt2.08□□□□□ -2.08
RPT4P53549 VPH1YOR270C 2523 nt2.08□□□□□ -2.08
RPT4P53549 YER068C-AYER068C-A 432 nt2.08□□□□□ -2.08
RPT4P53549 VOA1YGR106C 798 nt2.08□□□□□ -2.08
RPT4P53549 RPC10YHR143W-A 213 nt2.08□□□□□ -2.08
RPT4P53549 IRC19YLL033W 693 nt2.08□□□□□ -2.08
RPT4P53549 RMP1YLR145W 606 nt2.08□□□□□ -2.08
RPT4P53549 CTK3YML112W 891 nt2.08□□□□□ -2.08
RPT4P53549 SEN15YMR059W 387 nt2.08□□□□□ -2.08
RPT4P53549 MRPL44YMR225C 297 nt2.08□□□□□ -2.08
RPT4P53549 COX7YMR256C 183 nt2.08□□□□□ -2.08
RPT4P53549 PBI2YNL015W 228 nt2.08□□□□□ -2.08
RPT4P53549 NOP15YNL110C 663 nt2.08□□□□□ -2.08
RPT4P53549 ROX1YPR065W 1107 nt2.08□□□□□ -2.08
RPT4P53549 VMA9YCL005W-A 222 nt2.08□□□□□ -2.08
RPT4P53549 IST2YBR086C 2841 nt2.08□□□□□ -2.08
RPT4P53549 SIR4YDR227W 4077 nt2.07□□□□□ -2.08
RPT4P53549 FKS1YLR342W 5631 nt2.07□□□□□ -2.08
RPT4P53549 CDC53YDL132W 2448 nt2.07□□□□□ -2.08
RPT4P53549 DDR48YMR173W 1293 nt2.07□□□□□ -2.08
RPT4P53549 LYS9YNR050C 1341 nt2.07□□□□□ -2.08
RPT4P53549 SOK2YMR016C 2358 nt2.07□□□□□ -2.08
RPT4P53549 LSO2YGR169C-A 279 nt2.06□□□□□ -2.08
RPT4P53549 YHR073W-AYHR073W-A 177 nt2.06□□□□□ -2.08
RPT4P53549 YMR324CYMR324C 243 nt2.06□□□□□ -2.08
RPT4P53549 RTC6YPL183W-A 282 nt2.06□□□□□ -2.08
RPT4P53549 SFB2YNL049C 2631 nt2.06□□□□□ -2.08
RPT4P53549 HER1YOR227W 3741 nt2.06□□□□□ -2.08
RPT4P53549 CHC1YGL206C 4962 nt2.05□□□□□ -2.08
RPT4P53549 RPL27BYDR471W 411 nt2.05□□□□□ -2.08
RPT4P53549 YMR052C-AYMR052C-A 366 nt2.05□□□□□ -2.08
RPT4P53549 COA6YMR244C-A 315 nt2.05□□□□□ -2.08
RPT4P53549 YPL068CYPL068C 882 nt2.05□□□□□ -2.08
RPT4P53549 SLM6YBR266C 453 nt2.05□□□□□ -2.08
RPT4P53549 YBR012W-AYBR012W-A 1323 nt2.05□□□□□ -2.08
RPT4P53549 YOR142W-AYOR142W-A 1323 nt2.05□□□□□ -2.08
RPT4P53549 YPR158W-AYPR158W-A 1323 nt2.05□□□□□ -2.08
RPT4P53549 RUD3YOR216C 1455 nt2.05□□□□□ -2.08
RPT4P53549 IRC10YOL015W 1761 nt2.05□□□□□ -2.08
RPT4P53549 MNE1YOR350C 1992 nt2.05□□□□□ -2.08
RPT4P53549 TUS1YLR425W 3924 nt2.04□□□□□ -2.08
RPT4P53549 VPS52YDR484W 1926 nt2.04□□□□□ -2.08
RPT4P53549 HOP2YGL033W 657 nt2.04□□□□□ -2.08
RPT4P53549 YGR045CYGR045C 363 nt2.04□□□□□ -2.08
RPT4P53549 RTT101YJL047C 2529 nt2.03□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms