Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC25A1P53007 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC25A1P53007 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC25A1P53007 FAM21FP-204ENST00000608637 956 ntBASIC18.1■□□□□ 0.49
SLC25A1P53007 SMG8-203ENST00000578922 2178 ntBASIC18.1■□□□□ 0.49
SLC25A1P53007 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC25A1P53007 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC25A1P53007 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC25A1P53007 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SLC25A1P53007 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SLC25A1P53007 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC25A1P53007 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC25A1P53007 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SLC25A1P53007 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC25A1P53007 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC25A1P53007 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLC25A1P53007 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC25A1P53007 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.09■□□□□ 0.49
SLC25A1P53007 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC25A1P53007 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC25A1P53007 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC25A1P53007 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC25A1P53007 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC25A1P53007 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC25A1P53007 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.08■□□□□ 0.49
SLC25A1P53007 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC25A1P53007 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.08■□□□□ 0.49
SLC25A1P53007 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC25A1P53007 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC25A1P53007 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC25A1P53007 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC25A1P53007 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC25A1P53007 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC25A1P53007 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC25A1P53007 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC25A1P53007 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC25A1P53007 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC25A1P53007 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC25A1P53007 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC25A1P53007 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC25A1P53007 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC25A1P53007 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SLC25A1P53007 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SLC25A1P53007 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
SLC25A1P53007 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SLC25A1P53007 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SLC25A1P53007 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 KRT19P1-201ENST00000405746 1186 ntBASIC18.07■□□□□ 0.48
SLC25A1P53007 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC25A1P53007 CDV3P1-201ENST00000471403 739 ntBASIC18.07■□□□□ 0.48
SLC25A1P53007 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC25A1P53007 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SLC25A1P53007 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC25A1P53007 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
SLC25A1P53007 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC25A1P53007 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC25A1P53007 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC25A1P53007 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC25A1P53007 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SLC25A1P53007 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC25A1P53007 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC25A1P53007 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC25A1P53007 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC25A1P53007 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC25A1P53007 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC25A1P53007 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC25A1P53007 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC25A1P53007 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC25A1P53007 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC25A1P53007 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC25A1P53007 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SLC25A1P53007 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC25A1P53007 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC25A1P53007 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC25A1P53007 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC25A1P53007 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SLC25A1P53007 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SLC25A1P53007 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC25A1P53007 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC25A1P53007 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC25A1P53007 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC25A1P53007 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC25A1P53007 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC25A1P53007 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC25A1P53007 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms