Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.79■□□□□ 0.76
PDX1P52945 AC105020.6-201ENST00000621523 1217 ntBASIC19.79■□□□□ 0.76
PDX1P52945 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.79■□□□□ 0.76
PDX1P52945 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.79■□□□□ 0.76
PDX1P52945 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDX1P52945 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDX1P52945 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDX1P52945 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PDX1P52945 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.78■□□□□ 0.76
PDX1P52945 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.78■□□□□ 0.76
PDX1P52945 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDX1P52945 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDX1P52945 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.78■□□□□ 0.76
PDX1P52945 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.78■□□□□ 0.76
PDX1P52945 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.78■□□□□ 0.76
PDX1P52945 RN7SL471P-201ENST00000580476 299 ntBASIC19.78■□□□□ 0.76
PDX1P52945 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.78■□□□□ 0.76
PDX1P52945 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDX1P52945 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDX1P52945 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.78■□□□□ 0.76
PDX1P52945 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PDX1P52945 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PDX1P52945 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDX1P52945 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PDX1P52945 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PDX1P52945 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDX1P52945 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PDX1P52945 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDX1P52945 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDX1P52945 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDX1P52945 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PDX1P52945 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDX1P52945 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
PDX1P52945 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDX1P52945 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.77■□□□□ 0.76
PDX1P52945 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
PDX1P52945 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDX1P52945 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDX1P52945 KRT17P3-201ENST00000420566 1262 ntBASIC19.77■□□□□ 0.76
PDX1P52945 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PDX1P52945 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.77■□□□□ 0.76
PDX1P52945 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.77■□□□□ 0.76
PDX1P52945 FAM197Y4-202ENST00000622692 608 ntBASIC19.77■□□□□ 0.76
PDX1P52945 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDX1P52945 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.77■□□□□ 0.76
PDX1P52945 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PDX1P52945 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDX1P52945 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDX1P52945 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDX1P52945 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDX1P52945 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDX1P52945 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDX1P52945 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDX1P52945 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.76■□□□□ 0.75
PDX1P52945 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.76■□□□□ 0.75
PDX1P52945 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDX1P52945 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.76■□□□□ 0.75
PDX1P52945 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDX1P52945 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDX1P52945 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.76■□□□□ 0.75
PDX1P52945 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDX1P52945 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDX1P52945 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDX1P52945 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PDX1P52945 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDX1P52945 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.76■□□□□ 0.75
PDX1P52945 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDX1P52945 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.76■□□□□ 0.75
PDX1P52945 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.75■□□□□ 0.75
PDX1P52945 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDX1P52945 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDX1P52945 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.75■□□□□ 0.75
PDX1P52945 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDX1P52945 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDX1P52945 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.75■□□□□ 0.75
PDX1P52945 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
PDX1P52945 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.75■□□□□ 0.75
PDX1P52945 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.75■□□□□ 0.75
PDX1P52945 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.75■□□□□ 0.75
PDX1P52945 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.75■□□□□ 0.75
PDX1P52945 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.75■□□□□ 0.75
PDX1P52945 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDX1P52945 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDX1P52945 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDX1P52945 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PDX1P52945 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDX1P52945 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDX1P52945 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDX1P52945 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDX1P52945 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.74■□□□□ 0.75
PDX1P52945 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDX1P52945 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDX1P52945 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDX1P52945 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDX1P52945 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDX1P52945 MIR718-201ENST00000390190 70 ntBASIC19.74■□□□□ 0.75
PDX1P52945 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.74■□□□□ 0.75
PDX1P52945 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.74■□□□□ 0.75
PDX1P52945 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDX1P52945 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms