Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.02■□□□□ 0.63
SMSP52788 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SMSP52788 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMSP52788 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SMSP52788 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMSP52788 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
SMSP52788 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SMSP52788 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SMSP52788 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SMSP52788 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 PLK5-205ENST00000642079 1969 ntBASIC19.01■□□□□ 0.63
SMSP52788 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.01■□□□□ 0.63
SMSP52788 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.01■□□□□ 0.63
SMSP52788 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
SMSP52788 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.01■□□□□ 0.63
SMSP52788 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.01■□□□□ 0.63
SMSP52788 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.01■□□□□ 0.63
SMSP52788 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SMSP52788 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.01■□□□□ 0.63
SMSP52788 AC138907.5-202ENST00000569484 235 ntBASIC19.01■□□□□ 0.63
SMSP52788 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 AC013268.1-206ENST00000638368 961 ntBASIC19.01■□□□□ 0.63
SMSP52788 AC112229.1-201ENST00000639295 961 ntBASIC19.01■□□□□ 0.63
SMSP52788 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SMSP52788 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.01■□□□□ 0.63
SMSP52788 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.01■□□□□ 0.63
SMSP52788 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SMSP52788 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SMSP52788 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMSP52788 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SMSP52788 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMSP52788 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMSP52788 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMSP52788 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMSP52788 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMSP52788 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
SMSP52788 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SMSP52788 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMSP52788 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMSP52788 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SMSP52788 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19■□□□□ 0.63
SMSP52788 MIR4651-201ENST00000582622 73 ntBASIC19■□□□□ 0.63
SMSP52788 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19■□□□□ 0.63
SMSP52788 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SMSP52788 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19■□□□□ 0.63
SMSP52788 AC055733.4-201ENST00000638462 1354 ntBASIC19■□□□□ 0.63
SMSP52788 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19■□□□□ 0.63
SMSP52788 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SMSP52788 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SMSP52788 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SMSP52788 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SMSP52788 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMSP52788 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMSP52788 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMSP52788 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.99■□□□□ 0.63
SMSP52788 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.99■□□□□ 0.63
SMSP52788 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMSP52788 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.99■□□□□ 0.63
SMSP52788 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.99■□□□□ 0.63
SMSP52788 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMSP52788 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.99■□□□□ 0.63
SMSP52788 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.99■□□□□ 0.63
SMSP52788 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
SMSP52788 AC073314.1-201ENST00000568729 2216 ntBASIC18.99■□□□□ 0.63
SMSP52788 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMSP52788 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMSP52788 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.99■□□□□ 0.63
SMSP52788 CNN2P6-201ENST00000439038 900 ntBASIC18.99■□□□□ 0.63
SMSP52788 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMSP52788 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SMSP52788 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SMSP52788 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMSP52788 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SMSP52788 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.99■□□□□ 0.63
SMSP52788 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMSP52788 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SMSP52788 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMSP52788 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMSP52788 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMSP52788 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMSP52788 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMSP52788 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.98■□□□□ 0.63
SMSP52788 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMSP52788 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMSP52788 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMSP52788 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMSP52788 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms