Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2JP52435 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR2JP52435 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.46■□□□□ 0.71
POLR2JP52435 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2JP52435 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.46■□□□□ 0.71
POLR2JP52435 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR2JP52435 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
POLR2JP52435 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2JP52435 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2JP52435 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2JP52435 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2JP52435 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2JP52435 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
POLR2JP52435 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR2JP52435 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2JP52435 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2JP52435 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2JP52435 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2JP52435 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR2JP52435 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.45■□□□□ 0.7
POLR2JP52435 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2JP52435 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.45■□□□□ 0.7
POLR2JP52435 MIR6084-201ENST00000622012 110 ntBASIC19.45■□□□□ 0.7
POLR2JP52435 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
POLR2JP52435 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2JP52435 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.45■□□□□ 0.7
POLR2JP52435 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
POLR2JP52435 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2JP52435 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.45■□□□□ 0.7
POLR2JP52435 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2JP52435 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR2JP52435 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2JP52435 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2JP52435 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
POLR2JP52435 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2JP52435 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR2JP52435 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2JP52435 SUDS3P1-201ENST00000505831 966 ntBASIC19.44■□□□□ 0.7
POLR2JP52435 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2JP52435 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR2JP52435 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
POLR2JP52435 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2JP52435 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2JP52435 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
POLR2JP52435 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.44■□□□□ 0.7
POLR2JP52435 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
POLR2JP52435 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
POLR2JP52435 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2JP52435 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
POLR2JP52435 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
POLR2JP52435 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR2JP52435 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2JP52435 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR2JP52435 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2JP52435 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR2JP52435 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2JP52435 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2JP52435 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
POLR2JP52435 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR2JP52435 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2JP52435 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR2JP52435 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
POLR2JP52435 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR2JP52435 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2JP52435 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR2JP52435 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2JP52435 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR2JP52435 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2JP52435 AC010141.2-201ENST00000452426 721 ntBASIC19.43■□□□□ 0.7
POLR2JP52435 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR2JP52435 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR2JP52435 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2JP52435 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2JP52435 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2JP52435 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2JP52435 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR2JP52435 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
POLR2JP52435 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2JP52435 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
POLR2JP52435 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2JP52435 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2JP52435 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2JP52435 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2JP52435 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
POLR2JP52435 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.42■□□□□ 0.7
POLR2JP52435 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2JP52435 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2JP52435 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR2JP52435 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
POLR2JP52435 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.42■□□□□ 0.7
POLR2JP52435 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2JP52435 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2JP52435 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2JP52435 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.41■□□□□ 0.7
POLR2JP52435 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2JP52435 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
POLR2JP52435 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2JP52435 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR2JP52435 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2JP52435 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms