Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF144AP50876 AC004911.1-201ENST00000416316 871 ntBASIC18.88■□□□□ 0.61
RNF144AP50876 AC006015.1-201ENST00000429970 570 ntBASIC18.88■□□□□ 0.61
RNF144AP50876 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF144AP50876 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF144AP50876 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RNF144AP50876 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF144AP50876 SLC7A5P1-201ENST00000568957 537 ntBASIC18.88■□□□□ 0.61
RNF144AP50876 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF144AP50876 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF144AP50876 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.88■□□□□ 0.61
RNF144AP50876 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF144AP50876 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF144AP50876 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF144AP50876 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF144AP50876 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF144AP50876 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF144AP50876 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF144AP50876 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF144AP50876 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF144AP50876 AP005212.1-201ENST00000581547 1997 ntBASIC18.88■□□□□ 0.61
RNF144AP50876 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF144AP50876 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF144AP50876 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF144AP50876 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF144AP50876 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF144AP50876 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF144AP50876 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF144AP50876 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF144AP50876 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF144AP50876 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF144AP50876 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF144AP50876 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF144AP50876 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF144AP50876 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
RNF144AP50876 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF144AP50876 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF144AP50876 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF144AP50876 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF144AP50876 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF144AP50876 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
RNF144AP50876 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RNF144AP50876 AC016405.3-201ENST00000607710 860 ntBASIC18.87■□□□□ 0.61
RNF144AP50876 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF144AP50876 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF144AP50876 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF144AP50876 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF144AP50876 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RNF144AP50876 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RNF144AP50876 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF144AP50876 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF144AP50876 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
RNF144AP50876 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
RNF144AP50876 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF144AP50876 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF144AP50876 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF144AP50876 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF144AP50876 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF144AP50876 AC007322.3-201ENST00000426526 701 ntBASIC18.86■□□□□ 0.61
RNF144AP50876 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
RNF144AP50876 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF144AP50876 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF144AP50876 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF144AP50876 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF144AP50876 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RNF144AP50876 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF144AP50876 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF144AP50876 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF144AP50876 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF144AP50876 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF144AP50876 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF144AP50876 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF144AP50876 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF144AP50876 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF144AP50876 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF144AP50876 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF144AP50876 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF144AP50876 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF144AP50876 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF144AP50876 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF144AP50876 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF144AP50876 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF144AP50876 DUX4L16-201ENST00000555130 1264 ntBASIC18.85■□□□□ 0.61
RNF144AP50876 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
RNF144AP50876 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF144AP50876 AC243732.1-201ENST00000612648 864 ntBASIC18.85■□□□□ 0.61
RNF144AP50876 BID-214ENST00000617586 542 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF144AP50876 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF144AP50876 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
RNF144AP50876 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF144AP50876 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
RNF144AP50876 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RNF144AP50876 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF144AP50876 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF144AP50876 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF144AP50876 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF144AP50876 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF144AP50876 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
RNF144AP50876 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF144AP50876 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms