Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRP9P49458 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRP9P49458 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SRP9P49458 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
SRP9P49458 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18■□□□□ 0.47
SRP9P49458 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRP9P49458 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SRP9P49458 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRP9P49458 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
SRP9P49458 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18■□□□□ 0.47
SRP9P49458 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRP9P49458 TESC-206ENST00000541210 936 ntTSL 3 BASIC18■□□□□ 0.47
SRP9P49458 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18■□□□□ 0.47
SRP9P49458 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SRP9P49458 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18■□□□□ 0.47
SRP9P49458 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18■□□□□ 0.47
SRP9P49458 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRP9P49458 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
SRP9P49458 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
SRP9P49458 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
SRP9P49458 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SRP9P49458 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.99■□□□□ 0.47
SRP9P49458 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.99■□□□□ 0.47
SRP9P49458 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
SRP9P49458 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.99■□□□□ 0.47
SRP9P49458 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.99■□□□□ 0.47
SRP9P49458 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.99■□□□□ 0.47
SRP9P49458 NTF6G-201ENST00000591094 616 ntBASIC17.99■□□□□ 0.47
SRP9P49458 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.99■□□□□ 0.47
SRP9P49458 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.99■□□□□ 0.47
SRP9P49458 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.99■□□□□ 0.47
SRP9P49458 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP9P49458 SMG8-203ENST00000578922 2178 ntBASIC17.98■□□□□ 0.47
SRP9P49458 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP9P49458 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP9P49458 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRP9P49458 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP9P49458 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.98■□□□□ 0.47
SRP9P49458 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP9P49458 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP9P49458 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SRP9P49458 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.98■□□□□ 0.47
SRP9P49458 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.98■□□□□ 0.47
SRP9P49458 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.98■□□□□ 0.47
SRP9P49458 AC053503.5-201ENST00000601508 636 ntBASIC17.98■□□□□ 0.47
SRP9P49458 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRP9P49458 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRP9P49458 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP9P49458 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.98■□□□□ 0.47
SRP9P49458 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP9P49458 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.98■□□□□ 0.47
SRP9P49458 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.98■□□□□ 0.47
SRP9P49458 AC020907.5-201ENST00000624372 1936 ntBASIC17.98■□□□□ 0.47
SRP9P49458 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRP9P49458 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SRP9P49458 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRP9P49458 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRP9P49458 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRP9P49458 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SRP9P49458 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRP9P49458 AC098818.2-201ENST00000564925 2320 ntBASIC17.97■□□□□ 0.47
SRP9P49458 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRP9P49458 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
SRP9P49458 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.97■□□□□ 0.47
SRP9P49458 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRP9P49458 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.97■□□□□ 0.47
SRP9P49458 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRP9P49458 KRT19P1-201ENST00000405746 1186 ntBASIC17.97■□□□□ 0.47
SRP9P49458 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.97■□□□□ 0.47
SRP9P49458 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
SRP9P49458 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SRP9P49458 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.97■□□□□ 0.47
SRP9P49458 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SRP9P49458 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.97■□□□□ 0.47
SRP9P49458 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRP9P49458 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRP9P49458 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRP9P49458 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
SRP9P49458 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.97■□□□□ 0.47
SRP9P49458 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.97■□□□□ 0.47
SRP9P49458 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRP9P49458 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRP9P49458 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.97■□□□□ 0.47
SRP9P49458 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRP9P49458 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms