Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A12P48065 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SLC6A12P48065 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC6A12P48065 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A12P48065 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC6A12P48065 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A12P48065 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC6A12P48065 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC6A12P48065 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC6A12P48065 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC6A12P48065 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC6A12P48065 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A12P48065 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SLC6A12P48065 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A12P48065 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A12P48065 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A12P48065 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A12P48065 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC6A12P48065 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC6A12P48065 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC6A12P48065 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SLC6A12P48065 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC6A12P48065 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
SLC6A12P48065 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC6A12P48065 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC6A12P48065 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A12P48065 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A12P48065 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A12P48065 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A12P48065 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC6A12P48065 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A12P48065 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC6A12P48065 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A12P48065 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A12P48065 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
SLC6A12P48065 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A12P48065 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A12P48065 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SLC6A12P48065 AC004911.1-201ENST00000416316 871 ntBASIC19.68■□□□□ 0.74
SLC6A12P48065 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A12P48065 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC6A12P48065 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC6A12P48065 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A12P48065 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A12P48065 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC6A12P48065 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A12P48065 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SLC6A12P48065 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A12P48065 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A12P48065 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A12P48065 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC6A12P48065 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A12P48065 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A12P48065 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A12P48065 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SLC6A12P48065 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A12P48065 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
SLC6A12P48065 MCRIP2P1-201ENST00000394346 511 ntBASIC19.67■□□□□ 0.74
SLC6A12P48065 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC6A12P48065 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A12P48065 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.67■□□□□ 0.74
SLC6A12P48065 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC6A12P48065 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC6A12P48065 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A12P48065 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC6A12P48065 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A12P48065 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
SLC6A12P48065 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A12P48065 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC6A12P48065 AC099778.1-201ENST00000568593 1911 ntBASIC19.66■□□□□ 0.74
SLC6A12P48065 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC6A12P48065 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A12P48065 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A12P48065 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SLC6A12P48065 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC6A12P48065 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC6A12P48065 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC6A12P48065 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC6A12P48065 AC069236.1-201ENST00000604339 616 ntBASIC19.66■□□□□ 0.74
SLC6A12P48065 AC080038.1-201ENST00000611274 1154 ntBASIC19.66■□□□□ 0.74
SLC6A12P48065 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A12P48065 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A12P48065 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms