Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A3P43003 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A3P43003 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A3P43003 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC1A3P43003 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A3P43003 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A3P43003 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC1A3P43003 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SLC1A3P43003 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.7■□□□□ 0.58
SLC1A3P43003 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.7■□□□□ 0.58
SLC1A3P43003 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A3P43003 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A3P43003 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A3P43003 AC027702.1-201ENST00000563810 1770 ntBASIC18.7■□□□□ 0.58
SLC1A3P43003 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A3P43003 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A3P43003 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SLC1A3P43003 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SLC1A3P43003 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC1A3P43003 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A3P43003 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC1A3P43003 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A3P43003 FP700111.2-201ENST00000619190 1892 ntBASIC18.69■□□□□ 0.58
SLC1A3P43003 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A3P43003 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SLC1A3P43003 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SLC1A3P43003 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC1A3P43003 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A3P43003 AC007322.3-201ENST00000426526 701 ntBASIC18.69■□□□□ 0.58
SLC1A3P43003 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A3P43003 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SLC1A3P43003 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A3P43003 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC1A3P43003 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A3P43003 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC1A3P43003 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A3P43003 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A3P43003 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A3P43003 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A3P43003 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A3P43003 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SLC1A3P43003 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A3P43003 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A3P43003 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A3P43003 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.68■□□□□ 0.58
SLC1A3P43003 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A3P43003 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SLC1A3P43003 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A3P43003 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.68■□□□□ 0.58
SLC1A3P43003 AC006015.1-201ENST00000429970 570 ntBASIC18.68■□□□□ 0.58
SLC1A3P43003 CDV3P1-201ENST00000471403 739 ntBASIC18.68■□□□□ 0.58
SLC1A3P43003 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC1A3P43003 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SLC1A3P43003 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A3P43003 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC1A3P43003 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC1A3P43003 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SLC1A3P43003 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SLC1A3P43003 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SLC1A3P43003 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A3P43003 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SLC1A3P43003 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A3P43003 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SLC1A3P43003 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC1A3P43003 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC1A3P43003 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC1A3P43003 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A3P43003 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC1A3P43003 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC1A3P43003 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC1A3P43003 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A3P43003 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A3P43003 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SLC1A3P43003 PCDHAC2-203ENST00000615316 3011 ntBASIC18.67■□□□□ 0.58
SLC1A3P43003 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A3P43003 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC1A3P43003 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SLC1A3P43003 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A3P43003 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC1A3P43003 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC1A3P43003 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A3P43003 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
SLC1A3P43003 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SLC1A3P43003 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SLC1A3P43003 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC1A3P43003 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A3P43003 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A3P43003 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC1A3P43003 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A3P43003 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC1A3P43003 AFG3L1P-217ENST00000557444 2447 ntBASIC18.66■□□□□ 0.58
SLC1A3P43003 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
SLC1A3P43003 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC1A3P43003 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A3P43003 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A3P43003 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A3P43003 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC1A3P43003 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A3P43003 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A3P43003 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms