Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeast

Predictions only

Length 763 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	P42843	TOP2	YNL088W	4287 nt		2.71	□□□□□ -1.98
SKP2	P42843	SEC26	YDR238C	2922 nt		2.7	□□□□□ -1.98
SKP2	P42843	BRO1	YPL084W	2535 nt		2.7	□□□□□ -1.98
SKP2	P42843	AAD16	YFL057C	459 nt		2.7	□□□□□ -1.98
SKP2	P42843	ABM1	YJR108W	372 nt		2.7	□□□□□ -1.98
SKP2	P42843	YOR192C-C	YOR192C-C	237 nt		2.7	□□□□□ -1.98
SKP2	P42843	YBT1	YLL048C	4986 nt		2.7	□□□□□ -1.98
SKP2	P42843	PDR1	YGL013C	3207 nt		2.69	□□□□□ -1.98
SKP2	P42843	GPI8	YDR331W	1236 nt		2.69	□□□□□ -1.98
SKP2	P42843	YER189W	YER189W	369 nt		2.69	□□□□□ -1.98
SKP2	P42843	YHR086W-A	YHR086W-A	162 nt		2.69	□□□□□ -1.98
SKP2	P42843	tT(UGU)Q1	tT(UGU)Q1	76 nt		2.69	□□□□□ -1.98
SKP2	P42843	MRPL31	YKL138C	396 nt		2.69	□□□□□ -1.98
SKP2	P42843	ZEO1	YOL109W	342 nt		2.69	□□□□□ -1.98
SKP2	P42843	TPS2	YDR074W	2691 nt		2.69	□□□□□ -1.98
SKP2	P42843	APL5	YPL195W	2799 nt		2.69	□□□□□ -1.98
SKP2	P42843	YLR278C	YLR278C	4026 nt		2.69	□□□□□ -1.98
SKP2	P42843	SSQ1	YLR369W	1974 nt		2.69	□□□□□ -1.98
SKP2	P42843	SLH1	YGR271W	5904 nt		2.68	□□□□□ -1.98
SKP2	P42843	SAK1	YER129W	3429 nt		2.68	□□□□□ -1.98
SKP2	P42843	snR76	snR76	109 nt		2.68	□□□□□ -1.98
SKP2	P42843	PET191	YJR034W	327 nt		2.68	□□□□□ -1.98
SKP2	P42843	YKL111C	YKL111C	336 nt		2.68	□□□□□ -1.98
SKP2	P42843	AIM32	YML050W	936 nt		2.68	□□□□□ -1.98
SKP2	P42843	YPL038W-A	YPL038W-A	192 nt		2.68	□□□□□ -1.98
SKP2	P42843	FLO11	YIR019C	4104 nt		2.68	□□□□□ -1.98
SKP2	P42843	ISW1	YBR245C	3390 nt		2.68	□□□□□ -1.98
SKP2	P42843	DNL4	YOR005C	2835 nt		2.68	□□□□□ -1.98
SKP2	P42843	SMY2	YBR172C	2223 nt		2.68	□□□□□ -1.98
SKP2	P42843	CDC20	YGL116W	1833 nt		2.68	□□□□□ -1.98
SKP2	P42843	GCD10	YNL062C	1437 nt		2.68	□□□□□ -1.98
SKP2	P42843	SPC72	YAL047C	1869 nt		2.67	□□□□□ -1.98
SKP2	P42843	YKU80	YMR106C	1890 nt		2.67	□□□□□ -1.98
SKP2	P42843	SWT1	YOR166C	1377 nt		2.67	□□□□□ -1.98
SKP2	P42843	NHP2	YDL208W	471 nt		2.67	□□□□□ -1.98
SKP2	P42843	NUP82	YJL061W	2142 nt		2.67	□□□□□ -1.98
SKP2	P42843	FPR1	YNL135C	345 nt		2.67	□□□□□ -1.98
SKP2	P42843	RPL25	YOL127W	429 nt		2.67	□□□□□ -1.98
SKP2	P42843	YOR282W	YOR282W	321 nt		2.67	□□□□□ -1.98
SKP2	P42843	YPK1	YKL126W	2043 nt		2.67	□□□□□ -1.98
SKP2	P42843	YJL181W	YJL181W	1836 nt		2.67	□□□□□ -1.98
SKP2	P42843	BNR1	YIL159W	4128 nt		2.66	□□□□□ -1.98
SKP2	P42843	YBL005W-B	YBL005W-B	5268 nt		2.66	□□□□□ -1.98
SKP2	P42843	ATP17	YDR377W	306 nt		2.66	□□□□□ -1.98
SKP2	P42843	SDH7	YDR511W	402 nt		2.66	□□□□□ -1.98
SKP2	P42843	YHR139C-A	YHR139C-A	312 nt		2.66	□□□□□ -1.98
SKP2	P42843	YKL118W	YKL118W	312 nt		2.66	□□□□□ -1.98
SKP2	P42843	RPS29A	YLR388W	171 nt		2.66	□□□□□ -1.98
SKP2	P42843	RPL36A	YMR194W	303 nt		2.66	□□□□□ -1.98
SKP2	P42843	MRPL50	YNR022C	420 nt		2.66	□□□□□ -1.98
SKP2	P42843	MGR1	YCL044C	1254 nt		2.66	□□□□□ -1.98
SKP2	P42843	LEU3	YLR451W	2661 nt		2.65	□□□□□ -1.98
SKP2	P42843	MKT1	YNL085W	2493 nt		2.65	□□□□□ -1.98
SKP2	P42843	YDR239C	YDR239C	2364 nt		2.65	□□□□□ -1.98
SKP2	P42843	NIC96	YFR002W	2520 nt		2.65	□□□□□ -1.99
SKP2	P42843	PSD2	YGR170W	3417 nt		2.65	□□□□□ -1.99
SKP2	P42843	YDR209C	YDR209C	414 nt		2.65	□□□□□ -1.99
SKP2	P42843	SDC1	YDR469W	528 nt		2.65	□□□□□ -1.99
SKP2	P42843	YIL174W	YIL174W	228 nt		2.65	□□□□□ -1.99
SKP2	P42843	RPS22A	YJL190C	393 nt		2.65	□□□□□ -1.99
SKP2	P42843	YJL222W-A	YJL222W-A	228 nt		2.65	□□□□□ -1.99
SKP2	P42843	YAL042C-A	YAL042C-A	378 nt		2.65	□□□□□ -1.99
SKP2	P42843	RPS22B	YLR367W	393 nt		2.65	□□□□□ -1.99
SKP2	P42843	CRS5	YOR031W	210 nt		2.65	□□□□□ -1.99
SKP2	P42843	PDR11	YIL013C	4236 nt		2.65	□□□□□ -1.99
SKP2	P42843	GIN4	YDR507C	3429 nt		2.65	□□□□□ -1.99
SKP2	P42843	SWA2	YDR320C	2007 nt		2.64	□□□□□ -1.99
SKP2	P42843	SDC25	YLL016W	3147 nt		2.64	□□□□□ -1.99
SKP2	P42843	FAR11	YNL127W	2862 nt		2.64	□□□□□ -1.99
SKP2	P42843	YDL068W	YDL068W	330 nt		2.64	□□□□□ -1.99
SKP2	P42843	YGR035C	YGR035C	351 nt		2.64	□□□□□ -1.99
SKP2	P42843	RPS24B	YIL069C	408 nt		2.64	□□□□□ -1.99
SKP2	P42843	RAM2	YKL019W	951 nt		2.64	□□□□□ -1.99
SKP2	P42843	YLR255C	YLR255C	354 nt		2.64	□□□□□ -1.99
SKP2	P42843	YBR197C	YBR197C	654 nt		2.64	□□□□□ -1.99
SKP2	P42843	AMS1	YGL156W	3252 nt		2.64	□□□□□ -1.99
SKP2	P42843	INP52	YNL106C	3552 nt		2.64	□□□□□ -1.99
SKP2	P42843	ORC2	YBR060C	1863 nt		2.64	□□□□□ -1.99
SKP2	P42843	TMN3	YER113C	2121 nt		2.63	□□□□□ -1.99
SKP2	P42843	YIL156W-B	YIL156W-B	222 nt		2.63	□□□□□ -1.99
SKP2	P42843	ACM1	YPL267W	630 nt		2.63	□□□□□ -1.99
SKP2	P42843	VPS52	YDR484W	1926 nt		2.63	□□□□□ -1.99
SKP2	P42843	NUP170	YBL079W	4509 nt		2.63	□□□□□ -1.99
SKP2	P42843	EDS1	YBR033W	2760 nt		2.63	□□□□□ -1.99
SKP2	P42843	YDL041W	YDL041W	354 nt		2.62	□□□□□ -1.99
SKP2	P42843	YDL152W	YDL152W	366 nt		2.62	□□□□□ -1.99
SKP2	P42843	YMR031W-A	YMR031W-A	327 nt		2.62	□□□□□ -1.99
SKP2	P42843	NUM1	YDR150W	8247 nt		2.62	□□□□□ -1.99
SKP2	P42843	YJL016W	YJL016W	1686 nt		2.61	□□□□□ -1.99
SKP2	P42843	YDR413C	YDR413C	576 nt		2.61	□□□□□ -1.99
SKP2	P42843	PNC1	YGL037C	651 nt		2.61	□□□□□ -1.99
SKP2	P42843	RPL14B	YHL001W	417 nt		2.61	□□□□□ -1.99
SKP2	P42843	YHL037C	YHL037C	402 nt		2.61	□□□□□ -1.99
SKP2	P42843	MAM33	YIL070C	801 nt		2.61	□□□□□ -1.99
SKP2	P42843	COX7	YMR256C	183 nt		2.61	□□□□□ -1.99
SKP2	P42843	YPR010C-A	YPR010C-A	219 nt		2.61	□□□□□ -1.99
SKP2	P42843	SAP1	YER047C	2694 nt		2.61	□□□□□ -1.99
SKP2	P42843	KRE33	YNL132W	3171 nt		2.6	□□□□□ -1.99
SKP2	P42843	MMS1	YPR164W	4224 nt		2.6	□□□□□ -1.99
SKP2	P42843	YER097W	YER097W	330 nt		2.6	□□□□□ -1.99

Retrieved 100 of 7,029 protein–RNA pairs in 32.7 ms