Protein–RNA interactions for Protein: P42677

RPS27, 40S ribosomal protein S27, humanhuman

Known RBP Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27P42677 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS27P42677 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.06■□□□□ 0.48
RPS27P42677 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.06■□□□□ 0.48
RPS27P42677 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RPS27P42677 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPS27P42677 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS27P42677 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.06■□□□□ 0.48
RPS27P42677 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPS27P42677 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS27P42677 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS27P42677 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.05■□□□□ 0.48
RPS27P42677 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.05■□□□□ 0.48
RPS27P42677 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
RPS27P42677 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS27P42677 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RPS27P42677 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS27P42677 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS27P42677 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS27P42677 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS27P42677 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
RPS27P42677 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS27P42677 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RPS27P42677 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.05■□□□□ 0.48
RPS27P42677 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.05■□□□□ 0.48
RPS27P42677 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS27P42677 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS27P42677 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPS27P42677 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
RPS27P42677 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.05■□□□□ 0.48
RPS27P42677 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS27P42677 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RPS27P42677 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS27P42677 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS27P42677 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.05■□□□□ 0.48
RPS27P42677 RBM17P2-201ENST00000616397 1405 ntBASIC18.05■□□□□ 0.48
RPS27P42677 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.05■□□□□ 0.48
RPS27P42677 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RPS27P42677 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPS27P42677 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RPS27P42677 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPS27P42677 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RPS27P42677 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPS27P42677 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.04■□□□□ 0.48
RPS27P42677 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPS27P42677 AC091799.1-201ENST00000422823 811 ntBASIC18.04■□□□□ 0.48
RPS27P42677 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.04■□□□□ 0.48
RPS27P42677 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.04■□□□□ 0.48
RPS27P42677 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.04■□□□□ 0.48
RPS27P42677 MIR2861-201ENST00000636310 90 ntBASIC18.04■□□□□ 0.48
RPS27P42677 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RPS27P42677 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RPS27P42677 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.04■□□□□ 0.48
RPS27P42677 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.04■□□□□ 0.48
RPS27P42677 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPS27P42677 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RPS27P42677 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RPS27P42677 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.03■□□□□ 0.48
RPS27P42677 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.03■□□□□ 0.48
RPS27P42677 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS27P42677 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS27P42677 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS27P42677 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
RPS27P42677 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS27P42677 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.03■□□□□ 0.48
RPS27P42677 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS27P42677 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RPS27P42677 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.03■□□□□ 0.48
RPS27P42677 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS27P42677 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.03■□□□□ 0.48
RPS27P42677 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS27P42677 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.03■□□□□ 0.48
RPS27P42677 KRT18P20-201ENST00000548986 1279 ntBASIC18.03■□□□□ 0.48
RPS27P42677 UBE2DNL-204ENST00000602536 740 ntBASIC18.03■□□□□ 0.48
RPS27P42677 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RPS27P42677 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS27P42677 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RPS27P42677 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RPS27P42677 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS27P42677 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RPS27P42677 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.03■□□□□ 0.48
RPS27P42677 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.03■□□□□ 0.48
RPS27P42677 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS27P42677 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RPS27P42677 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPS27P42677 AC019069.1-201ENST00000610008 1333 ntBASIC18.02■□□□□ 0.48
RPS27P42677 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPS27P42677 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.02■□□□□ 0.48
RPS27P42677 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPS27P42677 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPS27P42677 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPS27P42677 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPS27P42677 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPS27P42677 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.02■□□□□ 0.48
RPS27P42677 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RPS27P42677 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPS27P42677 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPS27P42677 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
RPS27P42677 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.02■□□□□ 0.47
RPS27P42677 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RPS27P42677 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms