Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 RIX1YHR197W 2292 nt3.59□□□□□ -1.83
MSH4P40965 YDL185C-AYDL185C-A 228 nt3.59□□□□□ -1.83
MSH4P40965 BCH1YMR237W 2175 nt3.59□□□□□ -1.84
MSH4P40965 MAK21YDR060W 3078 nt3.58□□□□□ -1.84
MSH4P40965 MDM1YML104C 3384 nt3.58□□□□□ -1.84
MSH4P40965 YLL032CYLL032C 2478 nt3.58□□□□□ -1.84
MSH4P40965 snR85snR85 171 nt3.58□□□□□ -1.84
MSH4P40965 YIL020C-AYIL020C-A 339 nt3.58□□□□□ -1.84
MSH4P40965 TMA22YJR014W 597 nt3.58□□□□□ -1.84
MSH4P40965 YMR230W-AYMR230W-A 189 nt3.58□□□□□ -1.84
MSH4P40965 ESF2YNR054C 951 nt3.58□□□□□ -1.84
MSH4P40965 MF(ALPHA)1YPL187W 498 nt3.58□□□□□ -1.84
MSH4P40965 SSY1YDR160W 2559 nt3.58□□□□□ -1.84
MSH4P40965 KAP104YBR017C 2757 nt3.58□□□□□ -1.84
MSH4P40965 BOI1YBL085W 2943 nt3.58□□□□□ -1.84
MSH4P40965 TRS65YGR166W 1683 nt3.58□□□□□ -1.84
MSH4P40965 DBP6YNR038W 1890 nt3.58□□□□□ -1.84
MSH4P40965 POM152YMR129W 4014 nt3.57□□□□□ -1.84
MSH4P40965 YDR048CYDR048C 315 nt3.57□□□□□ -1.84
MSH4P40965 PDC2YDR081C 2778 nt3.57□□□□□ -1.84
MSH4P40965 RPS24AYER074W 408 nt3.57□□□□□ -1.84
MSH4P40965 RPL40AYIL148W 387 nt3.57□□□□□ -1.84
MSH4P40965 TRZ1YKR079C 2517 nt3.57□□□□□ -1.84
MSH4P40965 HTB2YBL002W 396 nt3.57□□□□□ -1.84
MSH4P40965 RPS12YOR369C 432 nt3.57□□□□□ -1.84
MSH4P40965 FUS1YCL027W 1539 nt3.57□□□□□ -1.84
MSH4P40965 YSP2YDR326C 4317 nt3.57□□□□□ -1.84
MSH4P40965 PSK1YAL017W 4071 nt3.57□□□□□ -1.84
MSH4P40965 HSK3YKL138C-A 210 nt3.56□□□□□ -1.84
MSH4P40965 YKR033CYKR033C 426 nt3.56□□□□□ -1.84
MSH4P40965 YPR014CYPR014C 330 nt3.56□□□□□ -1.84
MSH4P40965 YOL057WYOL057W 2136 nt3.55□□□□□ -1.84
MSH4P40965 snR55snR55 98 nt3.55□□□□□ -1.84
MSH4P40965 SDH6YDR379C-A 240 nt3.55□□□□□ -1.84
MSH4P40965 HPA3YEL066W 540 nt3.55□□□□□ -1.84
MSH4P40965 tQ(UUG)BtQ(UUG)B 72 nt3.55□□□□□ -1.84
MSH4P40965 YIL102CYIL102C 306 nt3.55□□□□□ -1.84
MSH4P40965 YLR342W-AYLR342W-A 174 nt3.55□□□□□ -1.84
MSH4P40965 COX14YML129C 213 nt3.55□□□□□ -1.84
MSH4P40965 YAT2YER024W 2772 nt3.55□□□□□ -1.84
MSH4P40965 NPR2YEL062W 1848 nt3.54□□□□□ -1.84
MSH4P40965 PHS1YJL097W 654 nt3.54□□□□□ -1.84
MSH4P40965 RPL36BYPL249C-A 303 nt3.54□□□□□ -1.84
MSH4P40965 MSS11YMR164C 2277 nt3.54□□□□□ -1.84
MSH4P40965 COG8YML071C 1824 nt3.54□□□□□ -1.84
MSH4P40965 ROM1YGR070W 3468 nt3.53□□□□□ -1.84
MSH4P40965 YME2YMR302C 2553 nt3.53□□□□□ -1.84
MSH4P40965 YMR31YFR049W 372 nt3.53□□□□□ -1.84
MSH4P40965 YPL182CYPL182C 384 nt3.53□□□□□ -1.84
MSH4P40965 DSE4YNR067C 3354 nt3.53□□□□□ -1.84
MSH4P40965 MVP1YMR004W 1536 nt3.53□□□□□ -1.84
MSH4P40965 SIN3YOL004W 4611 nt3.53□□□□□ -1.84
MSH4P40965 ECM21YBL101C 3354 nt3.52□□□□□ -1.85
MSH4P40965 YPP1YGR198W 2454 nt3.52□□□□□ -1.85
MSH4P40965 BNA4YBL098W 1383 nt3.52□□□□□ -1.85
MSH4P40965 AIM9YER080W 1884 nt3.52□□□□□ -1.85
MSH4P40965 DUF1YOL087C 3351 nt3.52□□□□□ -1.85
MSH4P40965 YHL006W-AYHL006W-A 354 nt3.52□□□□□ -1.85
MSH4P40965 YHL042WYHL042W 453 nt3.52□□□□□ -1.85
MSH4P40965 YIL032CYIL032C 357 nt3.52□□□□□ -1.85
MSH4P40965 YJL020W-AYJL020W-A 258 nt3.52□□□□□ -1.85
MSH4P40965 NCE101YJL205C 162 nt3.52□□□□□ -1.85
MSH4P40965 MET5YJR137C 4329 nt3.51□□□□□ -1.85
MSH4P40965 RGC1YPR115W 3252 nt3.51□□□□□ -1.85
MSH4P40965 VPS52YDR484W 1926 nt3.51□□□□□ -1.85
MSH4P40965 YJL222W-BYJL222W-B 138 nt3.51□□□□□ -1.85
MSH4P40965 YGL052WYGL052W 306 nt3.5□□□□□ -1.85
MSH4P40965 YJL150WYJL150W 303 nt3.5□□□□□ -1.85
MSH4P40965 SCW11YGL028C 1629 nt3.5□□□□□ -1.85
MSH4P40965 YDL041WYDL041W 354 nt3.49□□□□□ -1.85
MSH4P40965 GPG1YGL121C 381 nt3.49□□□□□ -1.85
MSH4P40965 RPS18BYML026C 441 nt3.49□□□□□ -1.85
MSH4P40965 YOR302WYOR302W 78 nt3.49□□□□□ -1.85
MSH4P40965 YBR197CYBR197C 654 nt3.49□□□□□ -1.85
MSH4P40965 YPL216WYPL216W 3309 nt3.49□□□□□ -1.85
MSH4P40965 RIM20YOR275C 1986 nt3.49□□□□□ -1.85
MSH4P40965 TIM11YDR322C-A 291 nt3.48□□□□□ -1.85
MSH4P40965 YER088C-AYER088C-A 324 nt3.48□□□□□ -1.85
MSH4P40965 NUP82YJL061W 2142 nt3.48□□□□□ -1.85
MSH4P40965 YMR194C-AYMR194C-A 225 nt3.48□□□□□ -1.85
MSH4P40965 RPL32YBL092W 393 nt3.48□□□□□ -1.85
MSH4P40965 ATP15YPL271W 189 nt3.48□□□□□ -1.85
MSH4P40965 SIP3YNL257C 3690 nt3.48□□□□□ -1.85
MSH4P40965 YIL058WYIL058W 285 nt3.47□□□□□ -1.85
MSH4P40965 CCW14YLR390W-A 717 nt3.47□□□□□ -1.85
MSH4P40965 YPK1YKL126W 2043 nt3.46□□□□□ -1.86
MSH4P40965 APC2YLR127C 2562 nt3.46□□□□□ -1.86
MSH4P40965 YNL034WYNL034W 1839 nt3.46□□□□□ -1.86
MSH4P40965 PRP39YML046W 1890 nt3.45□□□□□ -1.86
MSH4P40965 COG3YER157W 2406 nt3.45□□□□□ -1.86
MSH4P40965 ORC1YML065W 2745 nt3.45□□□□□ -1.86
MSH4P40965 VIK1YPL253C 1944 nt3.45□□□□□ -1.86
MSH4P40965 TCB2YNL087W 3537 nt3.45□□□□□ -1.86
MSH4P40965 DRS2YAL026C 4068 nt3.45□□□□□ -1.86
MSH4P40965 RSE1YML049C 4086 nt3.45□□□□□ -1.86
MSH4P40965 RGR1YLR071C 3249 nt3.45□□□□□ -1.86
MSH4P40965 NPR3YHL023C 3441 nt3.45□□□□□ -1.86
MSH4P40965 CHS2YBR038W 2892 nt3.45□□□□□ -1.86
MSH4P40965 snR79snR79 84 nt3.44□□□□□ -1.86
MSH4P40965 RPL23BYER117W 414 nt3.44□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 141.8 ms