Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MDH1P40925 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.46■□□□□ 0.87
MDH1P40925 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
MDH1P40925 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
MDH1P40925 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.46■□□□□ 0.87
MDH1P40925 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.46■□□□□ 0.87
MDH1P40925 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.46■□□□□ 0.87
MDH1P40925 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MDH1P40925 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MDH1P40925 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
MDH1P40925 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.46■□□□□ 0.87
MDH1P40925 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MDH1P40925 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MDH1P40925 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
MDH1P40925 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MDH1P40925 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MDH1P40925 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MDH1P40925 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.46■□□□□ 0.87
MDH1P40925 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MDH1P40925 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.87
MDH1P40925 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.45■□□□□ 0.86
MDH1P40925 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.45■□□□□ 0.86
MDH1P40925 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
MDH1P40925 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
MDH1P40925 TREX1-205ENST00000625293 1783 ntBASIC20.45■□□□□ 0.86
MDH1P40925 YBX1P4-201ENST00000392794 808 ntBASIC20.45■□□□□ 0.86
MDH1P40925 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MDH1P40925 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.45■□□□□ 0.86
MDH1P40925 AL031848.2-201ENST00000607670 837 ntBASIC20.45■□□□□ 0.86
MDH1P40925 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MDH1P40925 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MDH1P40925 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MDH1P40925 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MDH1P40925 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MDH1P40925 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
MDH1P40925 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
MDH1P40925 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
MDH1P40925 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MDH1P40925 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MDH1P40925 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
MDH1P40925 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MDH1P40925 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MDH1P40925 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
MDH1P40925 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
MDH1P40925 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
MDH1P40925 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.44■□□□□ 0.86
MDH1P40925 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MDH1P40925 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MDH1P40925 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
MDH1P40925 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.44■□□□□ 0.86
MDH1P40925 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MDH1P40925 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MDH1P40925 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MDH1P40925 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MDH1P40925 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.43■□□□□ 0.86
MDH1P40925 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
MDH1P40925 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
MDH1P40925 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.43■□□□□ 0.86
MDH1P40925 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.43■□□□□ 0.86
MDH1P40925 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MDH1P40925 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
MDH1P40925 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MDH1P40925 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
MDH1P40925 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.43■□□□□ 0.86
MDH1P40925 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MDH1P40925 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.43■□□□□ 0.86
MDH1P40925 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
MDH1P40925 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.43■□□□□ 0.86
MDH1P40925 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MDH1P40925 AC007613.1-201ENST00000572811 2597 ntBASIC20.42■□□□□ 0.86
MDH1P40925 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.42■□□□□ 0.86
MDH1P40925 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MDH1P40925 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MDH1P40925 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.42■□□□□ 0.86
MDH1P40925 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
MDH1P40925 MIR3181-201ENST00000578512 73 ntBASIC20.42■□□□□ 0.86
MDH1P40925 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MDH1P40925 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.42■□□□□ 0.86
MDH1P40925 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MDH1P40925 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.42■□□□□ 0.86
MDH1P40925 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
MDH1P40925 KRT8P33-201ENST00000508125 1423 ntBASIC20.42■□□□□ 0.86
MDH1P40925 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
MDH1P40925 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.42■□□□□ 0.86
MDH1P40925 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.42■□□□□ 0.86
MDH1P40925 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
MDH1P40925 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MDH1P40925 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
MDH1P40925 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MDH1P40925 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
MDH1P40925 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.41■□□□□ 0.86
MDH1P40925 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MDH1P40925 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MDH1P40925 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.41■□□□□ 0.86
MDH1P40925 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.41■□□□□ 0.86
MDH1P40925 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MDH1P40925 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
MDH1P40925 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
MDH1P40925 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.41■□□□□ 0.86
MDH1P40925 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms