Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 SGO1YOR073W 1773 nt2.9□□□□□ -1.94
TDP1P38319 SEC7YDR170C 6030 nt2.9□□□□□ -1.94
TDP1P38319 HCS1YKL017C 2052 nt2.9□□□□□ -1.95
TDP1P38319 MZM1YDR493W 372 nt2.9□□□□□ -1.95
TDP1P38319 HPA3YEL066W 540 nt2.9□□□□□ -1.95
TDP1P38319 YNL338WYNL338W 159 nt2.9□□□□□ -1.95
TDP1P38319 TFC4YGR047C 3078 nt2.9□□□□□ -1.95
TDP1P38319 NET1YJL076W 3570 nt2.9□□□□□ -1.95
TDP1P38319 YLL032CYLL032C 2478 nt2.9□□□□□ -1.95
TDP1P38319 DBP7YKR024C 2229 nt2.89□□□□□ -1.95
TDP1P38319 FRE2YKL220C 2136 nt2.89□□□□□ -1.95
TDP1P38319 YOL057WYOL057W 2136 nt2.89□□□□□ -1.95
TDP1P38319 AI2Q0055 2565 nt2.89□□□□□ -1.95
TDP1P38319 CSN9YDR179C 489 nt2.89□□□□□ -1.95
TDP1P38319 RPL14BYHL001W 417 nt2.89□□□□□ -1.95
TDP1P38319 YNL170WYNL170W 396 nt2.89□□□□□ -1.95
TDP1P38319 DSE4YNR067C 3354 nt2.89□□□□□ -1.95
TDP1P38319 NAN1YPL126W 2691 nt2.89□□□□□ -1.95
TDP1P38319 MOT1YPL082C 5604 nt2.89□□□□□ -1.95
TDP1P38319 DYN1YKR054C 12279 nt2.88□□□□□ -1.95
TDP1P38319 TPS2YDR074W 2691 nt2.88□□□□□ -1.95
TDP1P38319 NTO1YPR031W 2247 nt2.88□□□□□ -1.95
TDP1P38319 TMA22YJR014W 597 nt2.88□□□□□ -1.95
TDP1P38319 YOR072W-AYOR072W-A 249 nt2.88□□□□□ -1.95
TDP1P38319 MGR1YCL044C 1254 nt2.88□□□□□ -1.95
TDP1P38319 ESL1YIL151C 3357 nt2.88□□□□□ -1.95
TDP1P38319 TIM11YDR322C-A 291 nt2.87□□□□□ -1.95
TDP1P38319 YMR31YFR049W 372 nt2.87□□□□□ -1.95
TDP1P38319 RSN1YMR266W 2862 nt2.87□□□□□ -1.95
TDP1P38319 RAD61YDR014W 1944 nt2.87□□□□□ -1.95
TDP1P38319 SIP3YNL257C 3690 nt2.87□□□□□ -1.95
TDP1P38319 BNA4YBL098W 1383 nt2.87□□□□□ -1.95
TDP1P38319 TOM1YDR457W 9807 nt2.86□□□□□ -1.95
TDP1P38319 RAX2YLR084C 3663 nt2.86□□□□□ -1.95
TDP1P38319 SSY1YDR160W 2559 nt2.86□□□□□ -1.95
TDP1P38319 TAF2YCR042C 4224 nt2.86□□□□□ -1.95
TDP1P38319 RPS24AYER074W 408 nt2.86□□□□□ -1.95
TDP1P38319 YOR008C-AYOR008C-A 225 nt2.86□□□□□ -1.95
TDP1P38319 YBR064WYBR064W 429 nt2.86□□□□□ -1.95
TDP1P38319 VPS41YDR080W 2979 nt2.86□□□□□ -1.95
TDP1P38319 RGR1YLR071C 3249 nt2.86□□□□□ -1.95
TDP1P38319 COG3YER157W 2406 nt2.85□□□□□ -1.95
TDP1P38319 PSK1YAL017W 4071 nt2.85□□□□□ -1.95
TDP1P38319 INP52YNL106C 3552 nt2.85□□□□□ -1.95
TDP1P38319 FUS1YCL027W 1539 nt2.85□□□□□ -1.95
TDP1P38319 YGR174W-AYGR174W-A 87 nt2.85□□□□□ -1.95
TDP1P38319 MF(ALPHA)1YPL187W 498 nt2.85□□□□□ -1.95
TDP1P38319 YJL016WYJL016W 1686 nt2.85□□□□□ -1.95
TDP1P38319 FLO11YIR019C 4104 nt2.85□□□□□ -1.95
TDP1P38319 DBP6YNR038W 1890 nt2.84□□□□□ -1.95
TDP1P38319 YDR048CYDR048C 315 nt2.84□□□□□ -1.95
TDP1P38319 YHL005CYHL005C 393 nt2.84□□□□□ -1.95
TDP1P38319 NCE101YJL205C 162 nt2.84□□□□□ -1.95
TDP1P38319 YNL205CYNL205C 423 nt2.84□□□□□ -1.95
TDP1P38319 NPR1YNL183C 2373 nt2.84□□□□□ -1.95
TDP1P38319 APC2YLR127C 2562 nt2.84□□□□□ -1.96
TDP1P38319 REV1YOR346W 2958 nt2.84□□□□□ -1.96
TDP1P38319 BPT1YLL015W 4680 nt2.84□□□□□ -1.96
TDP1P38319 VPS52YDR484W 1926 nt2.83□□□□□ -1.96
TDP1P38319 YGR067CYGR067C 2415 nt2.83□□□□□ -1.96
TDP1P38319 SOK1YDR006C 2706 nt2.83□□□□□ -1.96
TDP1P38319 YHL006W-AYHL006W-A 354 nt2.83□□□□□ -1.96
TDP1P38319 YHR086W-AYHR086W-A 162 nt2.83□□□□□ -1.96
TDP1P38319 HTB2YBL002W 396 nt2.83□□□□□ -1.96
TDP1P38319 RPL36BYPL249C-A 303 nt2.83□□□□□ -1.96
TDP1P38319 RPA190YOR341W 4995 nt2.83□□□□□ -1.96
TDP1P38319 SPB1YCL054W 2526 nt2.82□□□□□ -1.96
TDP1P38319 MDM1YML104C 3384 nt2.82□□□□□ -1.96
TDP1P38319 YDL041WYDL041W 354 nt2.82□□□□□ -1.96
TDP1P38319 YDL185C-AYDL185C-A 228 nt2.82□□□□□ -1.96
TDP1P38319 YIL102CYIL102C 306 nt2.82□□□□□ -1.96
TDP1P38319 HSK3YKL138C-A 210 nt2.82□□□□□ -1.96
TDP1P38319 YKR033CYKR033C 426 nt2.82□□□□□ -1.96
TDP1P38319 RPL6AYML073C 531 nt2.82□□□□□ -1.96
TDP1P38319 YPL182CYPL182C 384 nt2.82□□□□□ -1.96
TDP1P38319 SLH1YGR271W 5904 nt2.82□□□□□ -1.96
TDP1P38319 NPR2YEL062W 1848 nt2.82□□□□□ -1.96
TDP1P38319 TRM2YKR056W 1920 nt2.81□□□□□ -1.96
TDP1P38319 ECM29YHL030W 5607 nt2.81□□□□□ -1.96
TDP1P38319 tF(GAA)DtF(GAA)D 73 nt2.81□□□□□ -1.96
TDP1P38319 tF(GAA)NtF(GAA)N 73 nt2.81□□□□□ -1.96
TDP1P38319 RPL40AYIL148W 387 nt2.81□□□□□ -1.96
TDP1P38319 YJL020W-AYJL020W-A 258 nt2.81□□□□□ -1.96
TDP1P38319 YMR230W-AYMR230W-A 189 nt2.81□□□□□ -1.96
TDP1P38319 RPL20AYMR242C 519 nt2.81□□□□□ -1.96
TDP1P38319 ESF2YNR054C 951 nt2.81□□□□□ -1.96
TDP1P38319 ATP15YPL271W 189 nt2.81□□□□□ -1.96
TDP1P38319 POM152YMR129W 4014 nt2.81□□□□□ -1.96
TDP1P38319 AIM9YER080W 1884 nt2.81□□□□□ -1.96
TDP1P38319 NUP82YJL061W 2142 nt2.81□□□□□ -1.96
TDP1P38319 JSN1YJR091C 3276 nt2.81□□□□□ -1.96
TDP1P38319 RGC1YPR115W 3252 nt2.8□□□□□ -1.96
TDP1P38319 MSS11YMR164C 2277 nt2.8□□□□□ -1.96
TDP1P38319 CDC20YGL116W 1833 nt2.8□□□□□ -1.96
TDP1P38319 COG8YML071C 1824 nt2.8□□□□□ -1.96
TDP1P38319 TRS65YGR166W 1683 nt2.8□□□□□ -1.96
TDP1P38319 PSY2YNL201C 2577 nt2.8□□□□□ -1.96
TDP1P38319 SRB8YCR081W 4284 nt2.8□□□□□ -1.96
TDP1P38319 PUF6YDR496C 1971 nt2.8□□□□□ -1.96
TDP1P38319 RLF2YPR018W 1821 nt2.79□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 16.7 ms