Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT20P35900 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT20P35900 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT20P35900 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
KRT20P35900 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT20P35900 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT20P35900 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT20P35900 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
KRT20P35900 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT20P35900 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT20P35900 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
KRT20P35900 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT20P35900 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
KRT20P35900 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT20P35900 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.27■□□□□ 0.68
KRT20P35900 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT20P35900 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT20P35900 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT20P35900 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT20P35900 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT20P35900 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
KRT20P35900 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
KRT20P35900 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT20P35900 AC073314.1-201ENST00000568729 2216 ntBASIC19.27■□□□□ 0.68
KRT20P35900 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT20P35900 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.27■□□□□ 0.68
KRT20P35900 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT20P35900 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT20P35900 MYCNOS-205ENST00000641950 531 ntBASIC19.27■□□□□ 0.68
KRT20P35900 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT20P35900 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT20P35900 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT20P35900 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT20P35900 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.27■□□□□ 0.68
KRT20P35900 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
KRT20P35900 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
KRT20P35900 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT20P35900 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT20P35900 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
KRT20P35900 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT20P35900 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT20P35900 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
KRT20P35900 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
KRT20P35900 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT20P35900 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT20P35900 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
KRT20P35900 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT20P35900 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT20P35900 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT20P35900 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT20P35900 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.26■□□□□ 0.67
KRT20P35900 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
KRT20P35900 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT20P35900 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
KRT20P35900 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KRT20P35900 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT20P35900 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KRT20P35900 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.26■□□□□ 0.67
KRT20P35900 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.26■□□□□ 0.67
KRT20P35900 SLC7A5P1-201ENST00000568957 537 ntBASIC19.26■□□□□ 0.67
KRT20P35900 AC022517.1-201ENST00000592429 346 ntBASIC19.26■□□□□ 0.67
KRT20P35900 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT20P35900 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT20P35900 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT20P35900 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT20P35900 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KRT20P35900 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT20P35900 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT20P35900 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT20P35900 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT20P35900 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT20P35900 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.25■□□□□ 0.67
KRT20P35900 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT20P35900 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
KRT20P35900 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT20P35900 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT20P35900 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
KRT20P35900 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
KRT20P35900 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.25■□□□□ 0.67
KRT20P35900 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.25■□□□□ 0.67
KRT20P35900 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT20P35900 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT20P35900 AFG3L1P-217ENST00000557444 2447 ntBASIC19.25■□□□□ 0.67
KRT20P35900 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT20P35900 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
KRT20P35900 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT20P35900 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.24■□□□□ 0.67
KRT20P35900 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
KRT20P35900 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT20P35900 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT20P35900 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.24■□□□□ 0.67
KRT20P35900 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT20P35900 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT20P35900 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.24■□□□□ 0.67
KRT20P35900 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
KRT20P35900 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.24■□□□□ 0.67
KRT20P35900 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.24■□□□□ 0.67
KRT20P35900 AL137784.2-201ENST00000607332 1000 ntBASIC19.24■□□□□ 0.67
KRT20P35900 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT20P35900 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms