Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SOX6P35712 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX6P35712 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SOX6P35712 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.23■□□□□ 0.51
SOX6P35712 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.23■□□□□ 0.51
SOX6P35712 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SOX6P35712 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SOX6P35712 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.23■□□□□ 0.51
SOX6P35712 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SOX6P35712 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
SOX6P35712 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.23■□□□□ 0.51
SOX6P35712 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.23■□□□□ 0.51
SOX6P35712 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX6P35712 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SOX6P35712 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SOX6P35712 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SOX6P35712 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.23■□□□□ 0.51
SOX6P35712 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX6P35712 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX6P35712 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SOX6P35712 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX6P35712 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SOX6P35712 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.23■□□□□ 0.51
SOX6P35712 LETM1P2-201ENST00000597330 2178 ntBASIC18.23■□□□□ 0.51
SOX6P35712 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
SOX6P35712 AL158211.5-201ENST00000623583 2518 ntBASIC18.22■□□□□ 0.51
SOX6P35712 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SOX6P35712 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
SOX6P35712 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.22■□□□□ 0.51
SOX6P35712 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 TSPY9P-201ENST00000440215 945 ntBASIC18.22■□□□□ 0.51
SOX6P35712 TSPY11P-201ENST00000442607 1045 ntBASIC18.22■□□□□ 0.51
SOX6P35712 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.22■□□□□ 0.51
SOX6P35712 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.22■□□□□ 0.51
SOX6P35712 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SOX6P35712 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.22■□□□□ 0.51
SOX6P35712 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SOX6P35712 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.22■□□□□ 0.51
SOX6P35712 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX6P35712 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX6P35712 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SOX6P35712 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX6P35712 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SOX6P35712 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX6P35712 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
SOX6P35712 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX6P35712 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.21■□□□□ 0.51
SOX6P35712 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.21■□□□□ 0.51
SOX6P35712 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SOX6P35712 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SOX6P35712 GUSBP5-201ENST00000418136 578 ntBASIC18.21■□□□□ 0.51
SOX6P35712 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.21■□□□□ 0.51
SOX6P35712 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.21■□□□□ 0.51
SOX6P35712 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.21■□□□□ 0.51
SOX6P35712 MTDHP2-201ENST00000601468 714 ntBASIC18.21■□□□□ 0.51
SOX6P35712 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.21■□□□□ 0.51
SOX6P35712 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX6P35712 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SOX6P35712 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.21■□□□□ 0.51
SOX6P35712 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX6P35712 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX6P35712 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX6P35712 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX6P35712 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SOX6P35712 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX6P35712 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.21■□□□□ 0.51
SOX6P35712 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
SOX6P35712 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX6P35712 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SOX6P35712 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SOX6P35712 BCL2-203ENST00000589955 5011 ntBASIC18.2■□□□□ 0.5
SOX6P35712 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.2■□□□□ 0.5
SOX6P35712 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX6P35712 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX6P35712 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX6P35712 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.2■□□□□ 0.5
SOX6P35712 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.2■□□□□ 0.5
SOX6P35712 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX6P35712 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SOX6P35712 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.2■□□□□ 0.5
SOX6P35712 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX6P35712 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms