Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 LINC01568-207ENST00000641790 1380 ntBASIC23.22■■□□□ 1.31
CTGFP29279 NBPF21P-201ENST00000425093 1451 ntBASIC23.22■■□□□ 1.31
CTGFP29279 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CTGFP29279 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTGFP29279 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTGFP29279 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTGFP29279 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTGFP29279 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.21■■□□□ 1.31
CTGFP29279 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.21■■□□□ 1.31
CTGFP29279 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CTGFP29279 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.21■■□□□ 1.31
CTGFP29279 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.21■■□□□ 1.31
CTGFP29279 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CTGFP29279 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.21■■□□□ 1.31
CTGFP29279 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.21■■□□□ 1.31
CTGFP29279 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CTGFP29279 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTGFP29279 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTGFP29279 AC127496.7-201ENST00000625110 1798 ntBASIC23.21■■□□□ 1.31
CTGFP29279 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTGFP29279 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.21■■□□□ 1.31
CTGFP29279 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTGFP29279 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CTGFP29279 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CTGFP29279 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CTGFP29279 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CTGFP29279 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CTGFP29279 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.2■■□□□ 1.3
CTGFP29279 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CTGFP29279 PGM5P4-201ENST00000421970 445 ntBASIC23.2■■□□□ 1.3
CTGFP29279 AL353807.1-201ENST00000427475 662 ntBASIC23.2■■□□□ 1.3
CTGFP29279 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.2■■□□□ 1.3
CTGFP29279 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CTGFP29279 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CTGFP29279 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.2■■□□□ 1.3
CTGFP29279 AC010947.1-201ENST00000623454 693 ntBASIC23.2■■□□□ 1.3
CTGFP29279 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.19■■□□□ 1.3
CTGFP29279 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CTGFP29279 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CTGFP29279 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CTGFP29279 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CTGFP29279 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CTGFP29279 AC104076.2-201ENST00000448912 469 ntBASIC23.19■■□□□ 1.3
CTGFP29279 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC23.19■■□□□ 1.3
CTGFP29279 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.19■■□□□ 1.3
CTGFP29279 NTF6B-201ENST00000591913 560 ntBASIC23.19■■□□□ 1.3
CTGFP29279 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CTGFP29279 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CTGFP29279 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CTGFP29279 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTGFP29279 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CTGFP29279 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CTGFP29279 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.18■■□□□ 1.3
CTGFP29279 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CTGFP29279 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CTGFP29279 UNC93B2-201ENST00000285383 730 ntBASIC23.18■■□□□ 1.3
CTGFP29279 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.18■■□□□ 1.3
CTGFP29279 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CTGFP29279 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTGFP29279 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CTGFP29279 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTGFP29279 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.18■■□□□ 1.3
CTGFP29279 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CTGFP29279 C1orf229-201ENST00000623686 2258 ntBASIC23.18■■□□□ 1.3
CTGFP29279 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTGFP29279 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTGFP29279 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.17■■□□□ 1.3
CTGFP29279 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CTGFP29279 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CTGFP29279 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.17■■□□□ 1.3
CTGFP29279 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.17■■□□□ 1.3
CTGFP29279 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC23.17■■□□□ 1.3
CTGFP29279 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.17■■□□□ 1.3
CTGFP29279 AL031963.3-201ENST00000606441 850 ntBASIC23.17■■□□□ 1.3
CTGFP29279 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.17■■□□□ 1.3
CTGFP29279 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTGFP29279 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTGFP29279 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CTGFP29279 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.16■■□□□ 1.3
CTGFP29279 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CTGFP29279 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CTGFP29279 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.16■■□□□ 1.3
CTGFP29279 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CTGFP29279 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.16■■□□□ 1.3
CTGFP29279 DUX4L26-201ENST00000489078 1255 ntBASIC23.16■■□□□ 1.3
CTGFP29279 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC23.16■■□□□ 1.3
CTGFP29279 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.16■■□□□ 1.3
CTGFP29279 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.16■■□□□ 1.3
CTGFP29279 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
CTGFP29279 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTGFP29279 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTGFP29279 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTGFP29279 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTGFP29279 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CTGFP29279 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CTGFP29279 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.15■■□□□ 1.3
CTGFP29279 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTGFP29279 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CTGFP29279 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.15■■□□□ 1.3
CTGFP29279 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms