Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APEX1P27695 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
APEX1P27695 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
APEX1P27695 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APEX1P27695 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
APEX1P27695 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.33■□□□□ 0.53
APEX1P27695 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.33■□□□□ 0.52
APEX1P27695 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.33■□□□□ 0.52
APEX1P27695 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
APEX1P27695 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.33■□□□□ 0.52
APEX1P27695 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.33■□□□□ 0.52
APEX1P27695 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.33■□□□□ 0.52
APEX1P27695 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APEX1P27695 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APEX1P27695 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
APEX1P27695 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
APEX1P27695 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APEX1P27695 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
APEX1P27695 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APEX1P27695 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APEX1P27695 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
APEX1P27695 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
APEX1P27695 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.32■□□□□ 0.52
APEX1P27695 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.32■□□□□ 0.52
APEX1P27695 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.32■□□□□ 0.52
APEX1P27695 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
APEX1P27695 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.32■□□□□ 0.52
APEX1P27695 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.32■□□□□ 0.52
APEX1P27695 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.32■□□□□ 0.52
APEX1P27695 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.32■□□□□ 0.52
APEX1P27695 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.32■□□□□ 0.52
APEX1P27695 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.32■□□□□ 0.52
APEX1P27695 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 AC112907.3-201ENST00000577781 2400 ntBASIC18.32■□□□□ 0.52
APEX1P27695 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APEX1P27695 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APEX1P27695 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
APEX1P27695 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.31■□□□□ 0.52
APEX1P27695 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.31■□□□□ 0.52
APEX1P27695 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APEX1P27695 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APEX1P27695 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APEX1P27695 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APEX1P27695 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
APEX1P27695 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.31■□□□□ 0.52
APEX1P27695 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.31■□□□□ 0.52
APEX1P27695 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.31■□□□□ 0.52
APEX1P27695 KRT18P61-201ENST00000585825 1298 ntBASIC18.31■□□□□ 0.52
APEX1P27695 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.31■□□□□ 0.52
APEX1P27695 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
APEX1P27695 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
APEX1P27695 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
APEX1P27695 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APEX1P27695 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.31■□□□□ 0.52
APEX1P27695 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
APEX1P27695 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
APEX1P27695 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
APEX1P27695 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.31■□□□□ 0.52
APEX1P27695 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APEX1P27695 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.31■□□□□ 0.52
APEX1P27695 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.31■□□□□ 0.52
APEX1P27695 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APEX1P27695 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.3■□□□□ 0.52
APEX1P27695 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.3■□□□□ 0.52
APEX1P27695 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APEX1P27695 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APEX1P27695 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
APEX1P27695 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APEX1P27695 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.3■□□□□ 0.52
APEX1P27695 AC004911.1-201ENST00000416316 871 ntBASIC18.3■□□□□ 0.52
APEX1P27695 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
APEX1P27695 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.3■□□□□ 0.52
APEX1P27695 AC138907.5-202ENST00000569484 235 ntBASIC18.3■□□□□ 0.52
APEX1P27695 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.3■□□□□ 0.52
APEX1P27695 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APEX1P27695 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
APEX1P27695 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APEX1P27695 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APEX1P27695 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
APEX1P27695 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
APEX1P27695 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APEX1P27695 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APEX1P27695 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
APEX1P27695 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.29■□□□□ 0.52
APEX1P27695 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
APEX1P27695 AP001160.3-201ENST00000601484 763 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms