Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPN3P26045 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPN3P26045 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PTPN3P26045 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN3P26045 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN3P26045 CYP21A1P-202ENST00000354927 1481 ntBASIC20.79■□□□□ 0.92
PTPN3P26045 AL162377.1-201ENST00000618844 1793 ntBASIC20.79■□□□□ 0.92
PTPN3P26045 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPN3P26045 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN3P26045 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN3P26045 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN3P26045 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN3P26045 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PTPN3P26045 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN3P26045 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN3P26045 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN3P26045 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN3P26045 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN3P26045 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN3P26045 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
PTPN3P26045 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PTPN3P26045 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN3P26045 RARRES2P4-201ENST00000514074 484 ntBASIC20.78■□□□□ 0.92
PTPN3P26045 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
PTPN3P26045 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN3P26045 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.78■□□□□ 0.92
PTPN3P26045 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN3P26045 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN3P26045 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN3P26045 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN3P26045 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN3P26045 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN3P26045 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN3P26045 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN3P26045 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN3P26045 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
PTPN3P26045 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.77■□□□□ 0.92
PTPN3P26045 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN3P26045 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN3P26045 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.77■□□□□ 0.92
PTPN3P26045 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.77■□□□□ 0.92
PTPN3P26045 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN3P26045 AC231657.2-201ENST00000624556 255 ntBASIC20.77■□□□□ 0.92
PTPN3P26045 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.77■□□□□ 0.92
PTPN3P26045 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.77■□□□□ 0.92
PTPN3P26045 AC087633.2-202ENST00000565166 1439 ntBASIC20.77■□□□□ 0.91
PTPN3P26045 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
PTPN3P26045 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PTPN3P26045 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.77■□□□□ 0.91
PTPN3P26045 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.77■□□□□ 0.91
PTPN3P26045 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PTPN3P26045 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN3P26045 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN3P26045 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN3P26045 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN3P26045 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN3P26045 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN3P26045 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPN3P26045 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN3P26045 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN3P26045 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN3P26045 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN3P26045 AC004911.1-201ENST00000416316 871 ntBASIC20.76■□□□□ 0.91
PTPN3P26045 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPN3P26045 CYP2T1P-201ENST00000432607 1285 ntBASIC20.76■□□□□ 0.91
PTPN3P26045 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN3P26045 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PTPN3P26045 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.76■□□□□ 0.91
PTPN3P26045 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPN3P26045 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PTPN3P26045 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN3P26045 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN3P26045 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN3P26045 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN3P26045 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPN3P26045 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN3P26045 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN3P26045 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN3P26045 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN3P26045 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PTPN3P26045 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN3P26045 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN3P26045 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN3P26045 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN3P26045 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PTPN3P26045 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN3P26045 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN3P26045 AC007322.1-201ENST00000426983 750 ntBASIC20.75■□□□□ 0.91
PTPN3P26045 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN3P26045 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.75■□□□□ 0.91
PTPN3P26045 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN3P26045 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
PTPN3P26045 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.75■□□□□ 0.91
PTPN3P26045 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN3P26045 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.75■□□□□ 0.91
PTPN3P26045 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN3P26045 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN3P26045 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN3P26045 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN3P26045 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms