Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 YML003WYML003W 873 nt2.68□□□□□ -1.98
MSH1P25846 ROX1YPR065W 1107 nt2.68□□□□□ -1.98
MSH1P25846 ISW1YBR245C 3390 nt2.68□□□□□ -1.98
MSH1P25846 UBP11YKR098C 2154 nt2.67□□□□□ -1.98
MSH1P25846 HOS4YIL112W 3252 nt2.67□□□□□ -1.98
MSH1P25846 SDC1YDR469W 528 nt2.67□□□□□ -1.98
MSH1P25846 YFR056CYFR056C 369 nt2.67□□□□□ -1.98
MSH1P25846 HSC82YMR186W 2118 nt2.67□□□□□ -1.98
MSH1P25846 LSM7YNL147W 348 nt2.67□□□□□ -1.98
MSH1P25846 YOR392WYOR392W 444 nt2.67□□□□□ -1.98
MSH1P25846 CBF2YGR140W 2871 nt2.67□□□□□ -1.98
MSH1P25846 VPS52YDR484W 1926 nt2.67□□□□□ -1.98
MSH1P25846 MPH1YIR002C 2982 nt2.67□□□□□ -1.98
MSH1P25846 SNX41YDR425W 1878 nt2.67□□□□□ -1.98
MSH1P25846 IPT1YDR072C 1584 nt2.66□□□□□ -1.98
MSH1P25846 YDR239CYDR239C 2364 nt2.66□□□□□ -1.98
MSH1P25846 FKS3YMR306W 5358 nt2.66□□□□□ -1.98
MSH1P25846 REV1YOR346W 2958 nt2.66□□□□□ -1.98
MSH1P25846 YER068C-AYER068C-A 432 nt2.66□□□□□ -1.98
MSH1P25846 YLR154W-EYLR154W-E 204 nt2.66□□□□□ -1.98
MSH1P25846 COX7YMR256C 183 nt2.66□□□□□ -1.98
MSH1P25846 YOR053WYOR053W 342 nt2.66□□□□□ -1.98
MSH1P25846 ATP3YBR039W 936 nt2.66□□□□□ -1.98
MSH1P25846 YKU80YMR106C 1890 nt2.66□□□□□ -1.98
MSH1P25846 NCL1YBL024W 2055 nt2.65□□□□□ -1.98
MSH1P25846 DAS1YJL149W 1992 nt2.65□□□□□ -1.98
MSH1P25846 SMY2YBR172C 2223 nt2.65□□□□□ -1.98
MSH1P25846 YEL043WYEL043W 2871 nt2.65□□□□□ -1.98
MSH1P25846 SNU114YKL173W 3027 nt2.65□□□□□ -1.99
MSH1P25846 NIC96YFR002W 2520 nt2.65□□□□□ -1.99
MSH1P25846 FMP16YDR070C 282 nt2.65□□□□□ -1.99
MSH1P25846 YGL014C-AYGL014C-A 162 nt2.65□□□□□ -1.99
MSH1P25846 VOA1YGR106C 798 nt2.65□□□□□ -1.99
MSH1P25846 PET191YJR034W 327 nt2.65□□□□□ -1.99
MSH1P25846 SHE2YKL130C 741 nt2.65□□□□□ -1.99
MSH1P25846 RPS29AYLR388W 171 nt2.65□□□□□ -1.99
MSH1P25846 YPP1YGR198W 2454 nt2.65□□□□□ -1.99
MSH1P25846 STE11YLR362W 2154 nt2.64□□□□□ -1.99
MSH1P25846 FAR11YNL127W 2862 nt2.64□□□□□ -1.99
MSH1P25846 TRS130YMR218C 3309 nt2.64□□□□□ -1.99
MSH1P25846 YJL070CYJL070C 2667 nt2.64□□□□□ -1.99
MSH1P25846 YDL025W-AYDL025W-A 105 nt2.64□□□□□ -1.99
MSH1P25846 YDL041WYDL041W 354 nt2.64□□□□□ -1.99
MSH1P25846 YJR011CYJR011C 786 nt2.64□□□□□ -1.99
MSH1P25846 YLR031WYLR031W 561 nt2.64□□□□□ -1.99
MSH1P25846 YLR287CYLR287C 1068 nt2.64□□□□□ -1.99
MSH1P25846 ERP4YOR016C 624 nt2.64□□□□□ -1.99
MSH1P25846 YBR277CYBR277C 402 nt2.64□□□□□ -1.99
MSH1P25846 NUM1YDR150W 8247 nt2.64□□□□□ -1.99
MSH1P25846 BUB1YGR188C 3066 nt2.64□□□□□ -1.99
MSH1P25846 NAB6YML117W 3405 nt2.64□□□□□ -1.99
MSH1P25846 SWT1YOR166C 1377 nt2.63□□□□□ -1.99
MSH1P25846 YDR250CYDR250C 276 nt2.63□□□□□ -1.99
MSH1P25846 MZM1YDR493W 372 nt2.63□□□□□ -1.99
MSH1P25846 ZEO1YOL109W 342 nt2.63□□□□□ -1.99
MSH1P25846 YOR050CYOR050C 348 nt2.63□□□□□ -1.99
MSH1P25846 ACM1YPL267W 630 nt2.63□□□□□ -1.99
MSH1P25846 YNL018CYNL018C 1839 nt2.63□□□□□ -1.99
MSH1P25846 YSW1YBR148W 1830 nt2.63□□□□□ -1.99
MSH1P25846 TUS1YLR425W 3924 nt2.62□□□□□ -1.99
MSH1P25846 PSD2YGR170W 3417 nt2.62□□□□□ -1.99
MSH1P25846 SPC72YAL047C 1869 nt2.62□□□□□ -1.99
MSH1P25846 ORC2YBR060C 1863 nt2.62□□□□□ -1.99
MSH1P25846 GIS1YDR096W 2685 nt2.62□□□□□ -1.99
MSH1P25846 IRC10YOL015W 1761 nt2.61□□□□□ -1.99
MSH1P25846 IRC8YJL051W 2469 nt2.61□□□□□ -1.99
MSH1P25846 RPL27BYDR471W 411 nt2.61□□□□□ -1.99
MSH1P25846 PEX4YGR133W 552 nt2.61□□□□□ -1.99
MSH1P25846 AYR1YIL124W 894 nt2.61□□□□□ -1.99
MSH1P25846 HIT1YJR055W 495 nt2.61□□□□□ -1.99
MSH1P25846 YKL066WYKL066W 444 nt2.61□□□□□ -1.99
MSH1P25846 YAL059C-AYAL059C-A 423 nt2.61□□□□□ -1.99
MSH1P25846 GRX8YLR364W 330 nt2.61□□□□□ -1.99
MSH1P25846 RPS22BYLR367W 393 nt2.61□□□□□ -1.99
MSH1P25846 YNL010WYNL010W 726 nt2.61□□□□□ -1.99
MSH1P25846 YOR192C-CYOR192C-C 237 nt2.61□□□□□ -1.99
MSH1P25846 MSL5YLR116W 1431 nt2.6□□□□□ -1.99
MSH1P25846 CDC24YAL041W 2565 nt2.59□□□□□ -1.99
MSH1P25846 SWA2YDR320C 2007 nt2.59□□□□□ -1.99
MSH1P25846 PDR3YBL005W 2931 nt2.59□□□□□ -1.99
MSH1P25846 SMD1YGR074W 441 nt2.59□□□□□ -1.99
MSH1P25846 TWF1YGR080W 999 nt2.59□□□□□ -1.99
MSH1P25846 RPS20YHL015W 366 nt2.59□□□□□ -1.99
MSH1P25846 tW(CCA)G1tW(CCA)G1 72 nt2.59□□□□□ -1.99
MSH1P25846 tW(CCA)G2tW(CCA)G2 72 nt2.59□□□□□ -1.99
MSH1P25846 tW(CCA)JtW(CCA)J 72 nt2.59□□□□□ -1.99
MSH1P25846 tW(CCA)KtW(CCA)K 72 nt2.59□□□□□ -1.99
MSH1P25846 tW(CCA)MtW(CCA)M 72 nt2.59□□□□□ -1.99
MSH1P25846 tW(CCA)PtW(CCA)P 72 nt2.59□□□□□ -1.99
MSH1P25846 YLR434CYLR434C 384 nt2.59□□□□□ -1.99
MSH1P25846 RPS18BYML026C 441 nt2.59□□□□□ -1.99
MSH1P25846 YMR324CYMR324C 243 nt2.59□□□□□ -1.99
MSH1P25846 YPL185WYPL185W 396 nt2.59□□□□□ -1.99
MSH1P25846 YPR197CYPR197C 564 nt2.59□□□□□ -1.99
MSH1P25846 COX1Q0045 1605 nt2.59□□□□□ -1.99
MSH1P25846 KRE33YNL132W 3171 nt2.59□□□□□ -2
MSH1P25846 MKT1YNL085W 2493 nt2.59□□□□□ -2
MSH1P25846 YHR139C-AYHR139C-A 312 nt2.58□□□□□ -2
MSH1P25846 BSC3YLR465C 309 nt2.58□□□□□ -2
MSH1P25846 OSW7YFR039C 1533 nt2.58□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 22.2 ms