Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
COL8A2P25067 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL8A2P25067 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.22■□□□□ 0.35
COL8A2P25067 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
COL8A2P25067 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.22■□□□□ 0.35
COL8A2P25067 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.22■□□□□ 0.35
COL8A2P25067 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.22■□□□□ 0.35
COL8A2P25067 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL8A2P25067 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL8A2P25067 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
COL8A2P25067 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL8A2P25067 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL8A2P25067 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.21■□□□□ 0.35
COL8A2P25067 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL8A2P25067 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL8A2P25067 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.21■□□□□ 0.35
COL8A2P25067 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL8A2P25067 AL049796.1-201ENST00000565336 1766 ntBASIC17.21■□□□□ 0.35
COL8A2P25067 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.21■□□□□ 0.35
COL8A2P25067 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL8A2P25067 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL8A2P25067 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.21■□□□□ 0.35
COL8A2P25067 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL8A2P25067 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.21■□□□□ 0.35
COL8A2P25067 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.21■□□□□ 0.35
COL8A2P25067 AC060766.5-201ENST00000590539 871 ntBASIC17.21■□□□□ 0.35
COL8A2P25067 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL8A2P25067 HLA-B-256ENST00000639848 1089 ntBASIC17.21■□□□□ 0.35
COL8A2P25067 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.21■□□□□ 0.35
COL8A2P25067 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL8A2P25067 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL8A2P25067 AC005229.4-201ENST00000610085 2198 ntBASIC17.21■□□□□ 0.34
COL8A2P25067 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL8A2P25067 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL8A2P25067 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL8A2P25067 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL8A2P25067 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL8A2P25067 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL8A2P25067 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.2■□□□□ 0.34
COL8A2P25067 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.2■□□□□ 0.34
COL8A2P25067 C2orf69P4-201ENST00000565394 541 ntBASIC17.2■□□□□ 0.34
COL8A2P25067 AC008687.6-201ENST00000596318 630 ntBASIC17.2■□□□□ 0.34
COL8A2P25067 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL8A2P25067 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL8A2P25067 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL8A2P25067 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.2■□□□□ 0.34
COL8A2P25067 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL8A2P25067 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL8A2P25067 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.2■□□□□ 0.34
COL8A2P25067 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COL8A2P25067 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
COL8A2P25067 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL8A2P25067 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL8A2P25067 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.19■□□□□ 0.34
COL8A2P25067 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.19■□□□□ 0.34
COL8A2P25067 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL8A2P25067 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL8A2P25067 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL8A2P25067 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.19■□□□□ 0.34
COL8A2P25067 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL8A2P25067 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL8A2P25067 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.19■□□□□ 0.34
COL8A2P25067 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.19■□□□□ 0.34
COL8A2P25067 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.19■□□□□ 0.34
COL8A2P25067 AC026366.1-201ENST00000488803 879 ntBASIC17.19■□□□□ 0.34
COL8A2P25067 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
COL8A2P25067 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL8A2P25067 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
COL8A2P25067 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
COL8A2P25067 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.19■□□□□ 0.34
COL8A2P25067 AC006058.3-201ENST00000606217 1069 ntBASIC17.19■□□□□ 0.34
COL8A2P25067 AL356652.1-201ENST00000615962 565 ntBASIC17.19■□□□□ 0.34
COL8A2P25067 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
COL8A2P25067 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL8A2P25067 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
COL8A2P25067 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.19■□□□□ 0.34
COL8A2P25067 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL8A2P25067 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL8A2P25067 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL8A2P25067 FEM1AP4-201ENST00000443167 1987 ntBASIC17.19■□□□□ 0.34
COL8A2P25067 SLC25A24-204ENST00000569674 2357 ntBASIC17.18■□□□□ 0.34
COL8A2P25067 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL8A2P25067 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL8A2P25067 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL8A2P25067 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.18■□□□□ 0.34
COL8A2P25067 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL8A2P25067 PRORSD1P-201ENST00000295112 541 ntBASIC17.18■□□□□ 0.34
COL8A2P25067 PGM5P4-201ENST00000421970 445 ntBASIC17.18■□□□□ 0.34
COL8A2P25067 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL8A2P25067 PNMA6B-201ENST00000538162 1200 ntBASIC17.18■□□□□ 0.34
COL8A2P25067 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.18■□□□□ 0.34
COL8A2P25067 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL8A2P25067 AC092368.3-202ENST00000574180 1591 ntBASIC17.18■□□□□ 0.34
COL8A2P25067 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL8A2P25067 AC121338.2-201ENST00000622535 1744 ntBASIC17.18■□□□□ 0.34
COL8A2P25067 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL8A2P25067 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.18■□□□□ 0.34
COL8A2P25067 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.17■□□□□ 0.34
COL8A2P25067 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.17■□□□□ 0.34
COL8A2P25067 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms