Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
ATF4P18848 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATF4P18848 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF4P18848 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.95■□□□□ 0.3
ATF4P18848 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ATF4P18848 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ATF4P18848 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ATF4P18848 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF4P18848 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.95■□□□□ 0.3
ATF4P18848 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF4P18848 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.95■□□□□ 0.3
ATF4P18848 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ATF4P18848 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ATF4P18848 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ATF4P18848 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATF4P18848 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF4P18848 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.95■□□□□ 0.3
ATF4P18848 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
ATF4P18848 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.95■□□□□ 0.3
ATF4P18848 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.95■□□□□ 0.3
ATF4P18848 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF4P18848 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.95■□□□□ 0.3
ATF4P18848 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.95■□□□□ 0.3
ATF4P18848 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF4P18848 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATF4P18848 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF4P18848 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATF4P18848 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF4P18848 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF4P18848 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
ATF4P18848 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.95■□□□□ 0.3
ATF4P18848 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ATF4P18848 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.95■□□□□ 0.3
ATF4P18848 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF4P18848 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF4P18848 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF4P18848 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF4P18848 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF4P18848 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.94■□□□□ 0.3
ATF4P18848 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.94■□□□□ 0.3
ATF4P18848 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.94■□□□□ 0.3
ATF4P18848 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ATF4P18848 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ATF4P18848 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATF4P18848 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF4P18848 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF4P18848 KRT16P3-201ENST00000439127 1283 ntBASIC16.94■□□□□ 0.3
ATF4P18848 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ATF4P18848 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.94■□□□□ 0.3
ATF4P18848 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATF4P18848 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.94■□□□□ 0.3
ATF4P18848 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ATF4P18848 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF4P18848 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.94■□□□□ 0.3
ATF4P18848 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF4P18848 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATF4P18848 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ATF4P18848 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF4P18848 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF4P18848 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.93■□□□□ 0.3
ATF4P18848 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.93■□□□□ 0.3
ATF4P18848 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF4P18848 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF4P18848 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF4P18848 AIRN-201ENST00000601203 4374 ntBASIC16.93■□□□□ 0.3
ATF4P18848 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF4P18848 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF4P18848 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF4P18848 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.93■□□□□ 0.3
ATF4P18848 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF4P18848 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
ATF4P18848 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATF4P18848 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.93■□□□□ 0.3
ATF4P18848 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF4P18848 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF4P18848 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF4P18848 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATF4P18848 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.92■□□□□ 0.3
ATF4P18848 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
ATF4P18848 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
ATF4P18848 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATF4P18848 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATF4P18848 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.92■□□□□ 0.3
ATF4P18848 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.92■□□□□ 0.3
ATF4P18848 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATF4P18848 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.92■□□□□ 0.3
ATF4P18848 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.92■□□□□ 0.3
ATF4P18848 UNC93B8-201ENST00000511903 705 ntBASIC16.92■□□□□ 0.3
ATF4P18848 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.92■□□□□ 0.3
ATF4P18848 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.92■□□□□ 0.3
ATF4P18848 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.92■□□□□ 0.3
ATF4P18848 AC092028.1-203ENST00000608262 953 ntBASIC16.92■□□□□ 0.3
ATF4P18848 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.92■□□□□ 0.3
ATF4P18848 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ATF4P18848 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ATF4P18848 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.92■□□□□ 0.3
ATF4P18848 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.92■□□□□ 0.3
ATF4P18848 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATF4P18848 AC019069.1-201ENST00000610008 1333 ntBASIC16.92■□□□□ 0.3
ATF4P18848 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms