Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VCLP18206 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
VCLP18206 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.41■□□□□ 0.86
VCLP18206 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
VCLP18206 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCLP18206 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
VCLP18206 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.41■□□□□ 0.86
VCLP18206 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VCLP18206 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.41■□□□□ 0.86
VCLP18206 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCLP18206 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCLP18206 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCLP18206 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCLP18206 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.41■□□□□ 0.86
VCLP18206 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VCLP18206 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VCLP18206 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCLP18206 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCLP18206 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
VCLP18206 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.41■□□□□ 0.86
VCLP18206 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VCLP18206 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VCLP18206 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.4■□□□□ 0.86
VCLP18206 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VCLP18206 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VCLP18206 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.4■□□□□ 0.86
VCLP18206 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
VCLP18206 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
VCLP18206 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.4■□□□□ 0.86
VCLP18206 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VCLP18206 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
VCLP18206 AC068338.2-201ENST00000563278 1430 ntBASIC20.4■□□□□ 0.86
VCLP18206 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VCLP18206 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VCLP18206 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.4■□□□□ 0.86
VCLP18206 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.4■□□□□ 0.86
VCLP18206 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.4■□□□□ 0.86
VCLP18206 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.4■□□□□ 0.86
VCLP18206 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.4■□□□□ 0.86
VCLP18206 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.39■□□□□ 0.86
VCLP18206 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
VCLP18206 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
VCLP18206 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.39■□□□□ 0.85
VCLP18206 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.39■□□□□ 0.85
VCLP18206 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
VCLP18206 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
VCLP18206 ID1-201ENST00000376105 1233 ntBASIC20.39■□□□□ 0.85
VCLP18206 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.39■□□□□ 0.85
VCLP18206 CYP2T1P-201ENST00000432607 1285 ntBASIC20.39■□□□□ 0.85
VCLP18206 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VCLP18206 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VCLP18206 AL121832.2-201ENST00000610979 668 ntBASIC20.39■□□□□ 0.85
VCLP18206 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.39■□□□□ 0.85
VCLP18206 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
VCLP18206 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCLP18206 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.39■□□□□ 0.85
VCLP18206 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCLP18206 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.39■□□□□ 0.85
VCLP18206 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.39■□□□□ 0.85
VCLP18206 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.39■□□□□ 0.85
VCLP18206 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.39■□□□□ 0.85
VCLP18206 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCLP18206 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
VCLP18206 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.38■□□□□ 0.85
VCLP18206 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCLP18206 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.38■□□□□ 0.85
VCLP18206 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.38■□□□□ 0.85
VCLP18206 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCLP18206 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
VCLP18206 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.38■□□□□ 0.85
VCLP18206 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.38■□□□□ 0.85
VCLP18206 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.38■□□□□ 0.85
VCLP18206 GPX1P1-201ENST00000388829 606 ntBASIC20.38■□□□□ 0.85
VCLP18206 NCF1B-203ENST00000435988 1254 ntBASIC20.38■□□□□ 0.85
VCLP18206 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.38■□□□□ 0.85
VCLP18206 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.38■□□□□ 0.85
VCLP18206 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.38■□□□□ 0.85
VCLP18206 AC133552.2-202ENST00000575694 574 ntBASIC20.38■□□□□ 0.85
VCLP18206 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCLP18206 OR10C1-204ENST00000622521 1039 ntBASIC20.38■□□□□ 0.85
VCLP18206 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCLP18206 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCLP18206 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VCLP18206 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCLP18206 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.38■□□□□ 0.85
VCLP18206 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
VCLP18206 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VCLP18206 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.37■□□□□ 0.85
VCLP18206 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
VCLP18206 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
VCLP18206 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.37■□□□□ 0.85
VCLP18206 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.37■□□□□ 0.85
VCLP18206 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
VCLP18206 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.37■□□□□ 0.85
VCLP18206 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VCLP18206 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
VCLP18206 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
VCLP18206 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VCLP18206 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
VCLP18206 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms