Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.88■□□□□ 0.93
BRAFP15056 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRAFP15056 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRAFP15056 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.88■□□□□ 0.93
BRAFP15056 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRAFP15056 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRAFP15056 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.88■□□□□ 0.93
BRAFP15056 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.88■□□□□ 0.93
BRAFP15056 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
BRAFP15056 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRAFP15056 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
BRAFP15056 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.88■□□□□ 0.93
BRAFP15056 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRAFP15056 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRAFP15056 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRAFP15056 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRAFP15056 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.88■□□□□ 0.93
BRAFP15056 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.88■□□□□ 0.93
BRAFP15056 KRT87P-202ENST00000534226 1464 ntBASIC20.88■□□□□ 0.93
BRAFP15056 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
BRAFP15056 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRAFP15056 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRAFP15056 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
BRAFP15056 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRAFP15056 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.87■□□□□ 0.93
BRAFP15056 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.87■□□□□ 0.93
BRAFP15056 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.87■□□□□ 0.93
BRAFP15056 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.87■□□□□ 0.93
BRAFP15056 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.87■□□□□ 0.93
BRAFP15056 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.87■□□□□ 0.93
BRAFP15056 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRAFP15056 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
BRAFP15056 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRAFP15056 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
BRAFP15056 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRAFP15056 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRAFP15056 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRAFP15056 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRAFP15056 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRAFP15056 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRAFP15056 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRAFP15056 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRAFP15056 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRAFP15056 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRAFP15056 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRAFP15056 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.86■□□□□ 0.93
BRAFP15056 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.86■□□□□ 0.93
BRAFP15056 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.86■□□□□ 0.93
BRAFP15056 AC099778.1-201ENST00000568593 1911 ntBASIC20.86■□□□□ 0.93
BRAFP15056 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRAFP15056 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.86■□□□□ 0.93
BRAFP15056 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRAFP15056 FP700111.2-201ENST00000619190 1892 ntBASIC20.86■□□□□ 0.93
BRAFP15056 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRAFP15056 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRAFP15056 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRAFP15056 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.85■□□□□ 0.93
BRAFP15056 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRAFP15056 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRAFP15056 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRAFP15056 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRAFP15056 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRAFP15056 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.85■□□□□ 0.93
BRAFP15056 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.85■□□□□ 0.93
BRAFP15056 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.85■□□□□ 0.93
BRAFP15056 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.85■□□□□ 0.93
BRAFP15056 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.85■□□□□ 0.93
BRAFP15056 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.85■□□□□ 0.93
BRAFP15056 AL137784.2-201ENST00000607332 1000 ntBASIC20.85■□□□□ 0.93
BRAFP15056 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRAFP15056 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRAFP15056 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRAFP15056 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRAFP15056 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.85■□□□□ 0.93
BRAFP15056 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRAFP15056 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
BRAFP15056 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRAFP15056 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
BRAFP15056 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRAFP15056 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRAFP15056 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRAFP15056 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRAFP15056 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
BRAFP15056 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.84■□□□□ 0.93
BRAFP15056 KRT19P1-201ENST00000405746 1186 ntBASIC20.84■□□□□ 0.93
BRAFP15056 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.84■□□□□ 0.93
BRAFP15056 AC104187.1-201ENST00000607510 612 ntBASIC20.84■□□□□ 0.93
BRAFP15056 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
BRAFP15056 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.84■□□□□ 0.93
BRAFP15056 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRAFP15056 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRAFP15056 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRAFP15056 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRAFP15056 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRAFP15056 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRAFP15056 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRAFP15056 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRAFP15056 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRAFP15056 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRAFP15056 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms