Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBL4AP11441 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBL4AP11441 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
UBL4AP11441 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.79■□□□□ 0.6
UBL4AP11441 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.79■□□□□ 0.6
UBL4AP11441 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.79■□□□□ 0.6
UBL4AP11441 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.79■□□□□ 0.6
UBL4AP11441 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBL4AP11441 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
UBL4AP11441 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBL4AP11441 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.79■□□□□ 0.6
UBL4AP11441 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL4AP11441 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.78■□□□□ 0.6
UBL4AP11441 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
UBL4AP11441 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
UBL4AP11441 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL4AP11441 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL4AP11441 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UBL4AP11441 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBL4AP11441 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.78■□□□□ 0.6
UBL4AP11441 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL4AP11441 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL4AP11441 DUX4L16-201ENST00000555130 1264 ntBASIC18.78■□□□□ 0.6
UBL4AP11441 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.78■□□□□ 0.6
UBL4AP11441 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.78■□□□□ 0.6
UBL4AP11441 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.78■□□□□ 0.6
UBL4AP11441 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
UBL4AP11441 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL4AP11441 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UBL4AP11441 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL4AP11441 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL4AP11441 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBL4AP11441 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.77■□□□□ 0.6
UBL4AP11441 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.77■□□□□ 0.6
UBL4AP11441 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBL4AP11441 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBL4AP11441 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBL4AP11441 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
UBL4AP11441 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.77■□□□□ 0.6
UBL4AP11441 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBL4AP11441 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.77■□□□□ 0.6
UBL4AP11441 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBL4AP11441 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.77■□□□□ 0.6
UBL4AP11441 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.77■□□□□ 0.6
UBL4AP11441 AL162412.1-201ENST00000567129 965 ntBASIC18.77■□□□□ 0.6
UBL4AP11441 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBL4AP11441 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBL4AP11441 FAM21FP-204ENST00000608637 956 ntBASIC18.77■□□□□ 0.6
UBL4AP11441 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBL4AP11441 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBL4AP11441 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBL4AP11441 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
UBL4AP11441 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.77■□□□□ 0.59
UBL4AP11441 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
UBL4AP11441 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL4AP11441 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL4AP11441 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL4AP11441 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
UBL4AP11441 FEM1AP1-201ENST00000431297 1995 ntBASIC18.76■□□□□ 0.59
UBL4AP11441 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBL4AP11441 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
UBL4AP11441 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL4AP11441 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL4AP11441 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL4AP11441 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBL4AP11441 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.76■□□□□ 0.59
UBL4AP11441 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL4AP11441 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.76■□□□□ 0.59
UBL4AP11441 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
UBL4AP11441 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL4AP11441 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBL4AP11441 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
UBL4AP11441 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UBL4AP11441 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.76■□□□□ 0.59
UBL4AP11441 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL4AP11441 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL4AP11441 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.75■□□□□ 0.59
UBL4AP11441 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.75■□□□□ 0.59
UBL4AP11441 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.75■□□□□ 0.59
UBL4AP11441 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.75■□□□□ 0.59
UBL4AP11441 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
UBL4AP11441 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
UBL4AP11441 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
UBL4AP11441 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
UBL4AP11441 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 CNN2P6-201ENST00000439038 900 ntBASIC18.75■□□□□ 0.59
UBL4AP11441 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms