Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AC006128.1-201ENST00000624704 1661 ntBASIC20.37■□□□□ 0.85
THRAP10827 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THRAP10827 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THRAP10827 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
THRAP10827 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
THRAP10827 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
THRAP10827 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.36■□□□□ 0.85
THRAP10827 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
THRAP10827 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.36■□□□□ 0.85
THRAP10827 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
THRAP10827 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
THRAP10827 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.36■□□□□ 0.85
THRAP10827 AF201337.1-201ENST00000520239 748 ntBASIC20.36■□□□□ 0.85
THRAP10827 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
THRAP10827 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
THRAP10827 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.36■□□□□ 0.85
THRAP10827 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.36■□□□□ 0.85
THRAP10827 AC133552.2-202ENST00000575694 574 ntBASIC20.36■□□□□ 0.85
THRAP10827 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
THRAP10827 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
THRAP10827 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
THRAP10827 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
THRAP10827 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
THRAP10827 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
THRAP10827 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.36■□□□□ 0.85
THRAP10827 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
THRAP10827 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.35■□□□□ 0.85
THRAP10827 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
THRAP10827 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
THRAP10827 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.35■□□□□ 0.85
THRAP10827 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
THRAP10827 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
THRAP10827 ABHD17AP1-201ENST00000358206 933 ntBASIC20.35■□□□□ 0.85
THRAP10827 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
THRAP10827 AL138781.1-201ENST00000566567 1274 ntBASIC20.35■□□□□ 0.85
THRAP10827 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.35■□□□□ 0.85
THRAP10827 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
THRAP10827 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
THRAP10827 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
THRAP10827 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
THRAP10827 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
THRAP10827 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
THRAP10827 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
THRAP10827 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THRAP10827 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THRAP10827 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THRAP10827 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.34■□□□□ 0.85
THRAP10827 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.34■□□□□ 0.85
THRAP10827 AC007322.4-201ENST00000509611 723 ntBASIC20.34■□□□□ 0.85
THRAP10827 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.34■□□□□ 0.85
THRAP10827 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
THRAP10827 AC105036.2-201ENST00000569468 176 ntBASIC20.34■□□□□ 0.85
THRAP10827 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THRAP10827 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
THRAP10827 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
THRAP10827 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THRAP10827 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.34■□□□□ 0.85
THRAP10827 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
THRAP10827 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THRAP10827 AC073314.1-201ENST00000568729 2216 ntBASIC20.34■□□□□ 0.85
THRAP10827 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.34■□□□□ 0.85
THRAP10827 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
THRAP10827 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
THRAP10827 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
THRAP10827 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
THRAP10827 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
THRAP10827 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.33■□□□□ 0.85
THRAP10827 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
THRAP10827 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
THRAP10827 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
THRAP10827 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.33■□□□□ 0.85
THRAP10827 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.33■□□□□ 0.85
THRAP10827 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.33■□□□□ 0.85
THRAP10827 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
THRAP10827 AC008175.2-201ENST00000612840 297 ntBASIC20.33■□□□□ 0.85
THRAP10827 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
THRAP10827 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
THRAP10827 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
THRAP10827 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
THRAP10827 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
THRAP10827 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
THRAP10827 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
THRAP10827 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
THRAP10827 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THRAP10827 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
THRAP10827 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THRAP10827 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THRAP10827 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
THRAP10827 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
THRAP10827 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.32■□□□□ 0.84
THRAP10827 CYP2T1P-201ENST00000432607 1285 ntBASIC20.32■□□□□ 0.84
THRAP10827 CD99P1-205ENST00000527459 561 ntBASIC20.32■□□□□ 0.84
THRAP10827 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.32■□□□□ 0.84
THRAP10827 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
THRAP10827 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.32■□□□□ 0.84
THRAP10827 AC120498.10-201ENST00000621827 505 ntBASIC20.32■□□□□ 0.84
THRAP10827 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THRAP10827 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
THRAP10827 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.32■□□□□ 0.84
THRAP10827 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms