Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM3P0C091 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM3P0C091 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.52■□□□□ 0.56
FREM3P0C091 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM3P0C091 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.52■□□□□ 0.56
FREM3P0C091 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FREM3P0C091 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM3P0C091 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
FREM3P0C091 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
FREM3P0C091 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM3P0C091 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FREM3P0C091 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.52■□□□□ 0.55
FREM3P0C091 POU5F1P3-201ENST00000428824 1078 ntBASIC18.52■□□□□ 0.55
FREM3P0C091 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.52■□□□□ 0.55
FREM3P0C091 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.52■□□□□ 0.55
FREM3P0C091 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.52■□□□□ 0.55
FREM3P0C091 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.52■□□□□ 0.55
FREM3P0C091 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
FREM3P0C091 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
FREM3P0C091 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
FREM3P0C091 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
FREM3P0C091 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
FREM3P0C091 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FREM3P0C091 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
FREM3P0C091 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
FREM3P0C091 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FREM3P0C091 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FREM3P0C091 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FREM3P0C091 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FREM3P0C091 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FREM3P0C091 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FREM3P0C091 LSM12P1-201ENST00000411836 588 ntBASIC18.51■□□□□ 0.55
FREM3P0C091 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.51■□□□□ 0.55
FREM3P0C091 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FREM3P0C091 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FREM3P0C091 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.5■□□□□ 0.55
FREM3P0C091 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FREM3P0C091 KRT18P68-201ENST00000392293 1000 ntBASIC18.5■□□□□ 0.55
FREM3P0C091 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
FREM3P0C091 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.5■□□□□ 0.55
FREM3P0C091 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.5■□□□□ 0.55
FREM3P0C091 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FREM3P0C091 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.5■□□□□ 0.55
FREM3P0C091 AC142381.4-202ENST00000563973 229 ntBASIC18.5■□□□□ 0.55
FREM3P0C091 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FREM3P0C091 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FREM3P0C091 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.5■□□□□ 0.55
FREM3P0C091 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FREM3P0C091 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.5■□□□□ 0.55
FREM3P0C091 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FREM3P0C091 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.5■□□□□ 0.55
FREM3P0C091 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FREM3P0C091 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FREM3P0C091 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.5■□□□□ 0.55
FREM3P0C091 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.5■□□□□ 0.55
FREM3P0C091 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.5■□□□□ 0.55
FREM3P0C091 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
FREM3P0C091 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
FREM3P0C091 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
FREM3P0C091 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.49■□□□□ 0.55
FREM3P0C091 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FREM3P0C091 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FREM3P0C091 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FREM3P0C091 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.49■□□□□ 0.55
FREM3P0C091 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FREM3P0C091 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
FREM3P0C091 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FREM3P0C091 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.49■□□□□ 0.55
FREM3P0C091 AC008403.3-201ENST00000598924 454 ntBASIC18.49■□□□□ 0.55
FREM3P0C091 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FREM3P0C091 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FREM3P0C091 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
FREM3P0C091 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
FREM3P0C091 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FREM3P0C091 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
FREM3P0C091 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FREM3P0C091 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FREM3P0C091 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.49■□□□□ 0.55
FREM3P0C091 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
FREM3P0C091 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.49■□□□□ 0.55
FREM3P0C091 PNMA6B-201ENST00000538162 1200 ntBASIC18.49■□□□□ 0.55
FREM3P0C091 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FREM3P0C091 AC060766.5-201ENST00000590539 871 ntBASIC18.49■□□□□ 0.55
FREM3P0C091 AC066615.1-201ENST00000640911 628 ntBASIC18.49■□□□□ 0.55
FREM3P0C091 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FREM3P0C091 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FREM3P0C091 AC006128.1-201ENST00000624704 1661 ntBASIC18.48■□□□□ 0.55
FREM3P0C091 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
FREM3P0C091 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
FREM3P0C091 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FREM3P0C091 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
FREM3P0C091 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FREM3P0C091 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
FREM3P0C091 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FREM3P0C091 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FREM3P0C091 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.48■□□□□ 0.55
FREM3P0C091 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
FREM3P0C091 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.48■□□□□ 0.55
FREM3P0C091 AP003097.1-201ENST00000530657 1135 ntBASIC18.48■□□□□ 0.55
FREM3P0C091 ITM2C-210ENST00000620962 501 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms