Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 MIR2861-201ENST00000636310 90 ntBASIC26.1■■□□□ 1.77
SNRPA1P09661 KRT8P36-201ENST00000489121 1440 ntBASIC26.1■■□□□ 1.77
SNRPA1P09661 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNRPA1P09661 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNRPA1P09661 AL049796.1-201ENST00000565336 1766 ntBASIC26.1■■□□□ 1.77
SNRPA1P09661 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
SNRPA1P09661 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNRPA1P09661 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNRPA1P09661 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC26.09■■□□□ 1.77
SNRPA1P09661 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SNRPA1P09661 AC133681.1-201ENST00000465482 601 ntBASIC26.09■■□□□ 1.77
SNRPA1P09661 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SNRPA1P09661 LY6E-205ENST00000519611 635 ntTSL 3 BASIC26.09■■□□□ 1.77
SNRPA1P09661 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC26.09■■□□□ 1.77
SNRPA1P09661 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
SNRPA1P09661 AC124016.1-201ENST00000609552 612 ntBASIC26.09■■□□□ 1.77
SNRPA1P09661 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC26.09■■□□□ 1.77
SNRPA1P09661 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SNRPA1P09661 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC26.09■■□□□ 1.77
SNRPA1P09661 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC26.09■■□□□ 1.77
SNRPA1P09661 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
SNRPA1P09661 BID-212ENST00000614949 1988 ntTSL 5 BASIC26.09■■□□□ 1.77
SNRPA1P09661 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
SNRPA1P09661 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
SNRPA1P09661 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNRPA1P09661 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SNRPA1P09661 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.08■■□□□ 1.77
SNRPA1P09661 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SNRPA1P09661 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SNRPA1P09661 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SNRPA1P09661 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
SNRPA1P09661 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SNRPA1P09661 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.08■■□□□ 1.77
SNRPA1P09661 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SNRPA1P09661 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SNRPA1P09661 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SNRPA1P09661 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC26.08■■□□□ 1.77
SNRPA1P09661 AL023875.1-201ENST00000640777 796 ntBASIC26.08■■□□□ 1.77
SNRPA1P09661 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SNRPA1P09661 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC26.08■■□□□ 1.77
SNRPA1P09661 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.08■■□□□ 1.77
SNRPA1P09661 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC26.08■■□□□ 1.76
SNRPA1P09661 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
SNRPA1P09661 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
SNRPA1P09661 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC26.07■■□□□ 1.76
SNRPA1P09661 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC26.07■■□□□ 1.76
SNRPA1P09661 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.07■■□□□ 1.76
SNRPA1P09661 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
SNRPA1P09661 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC26.07■■□□□ 1.76
SNRPA1P09661 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SNRPA1P09661 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC26.07■■□□□ 1.76
SNRPA1P09661 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
SNRPA1P09661 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SNRPA1P09661 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNRPA1P09661 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNRPA1P09661 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNRPA1P09661 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SNRPA1P09661 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC26.06■■□□□ 1.76
SNRPA1P09661 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.06■■□□□ 1.76
SNRPA1P09661 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.06■■□□□ 1.76
SNRPA1P09661 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.06■■□□□ 1.76
SNRPA1P09661 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNRPA1P09661 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
SNRPA1P09661 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC26.06■■□□□ 1.76
SNRPA1P09661 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SNRPA1P09661 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNRPA1P09661 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNRPA1P09661 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNRPA1P09661 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SNRPA1P09661 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNRPA1P09661 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
SNRPA1P09661 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC26.05■■□□□ 1.76
SNRPA1P09661 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC26.05■■□□□ 1.76
SNRPA1P09661 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC26.05■■□□□ 1.76
SNRPA1P09661 MIR4497-201ENST00000583208 89 ntBASIC26.05■■□□□ 1.76
SNRPA1P09661 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNRPA1P09661 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNRPA1P09661 AC121338.2-201ENST00000622535 1744 ntBASIC26.05■■□□□ 1.76
SNRPA1P09661 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNRPA1P09661 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.05■■□□□ 1.76
SNRPA1P09661 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNRPA1P09661 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNRPA1P09661 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNRPA1P09661 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNRPA1P09661 HES2-206ENST00000489730 730 ntTSL 2 BASIC26.04■■□□□ 1.76
SNRPA1P09661 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC26.04■■□□□ 1.76
SNRPA1P09661 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC26.04■■□□□ 1.76
SNRPA1P09661 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.04■■□□□ 1.76
SNRPA1P09661 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC26.04■■□□□ 1.76
SNRPA1P09661 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
SNRPA1P09661 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNRPA1P09661 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNRPA1P09661 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNRPA1P09661 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC26.04■■□□□ 1.76
SNRPA1P09661 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNRPA1P09661 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNRPA1P09661 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC26.04■■□□□ 1.76
SNRPA1P09661 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
SNRPA1P09661 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC26.03■■□□□ 1.76
SNRPA1P09661 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms