Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HOXC6P09630 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HOXC6P09630 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
HOXC6P09630 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.16■■□□□ 1.3
HOXC6P09630 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.16■■□□□ 1.3
HOXC6P09630 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HOXC6P09630 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.16■■□□□ 1.3
HOXC6P09630 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.16■■□□□ 1.3
HOXC6P09630 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.16■■□□□ 1.3
HOXC6P09630 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
HOXC6P09630 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
HOXC6P09630 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.16■■□□□ 1.3
HOXC6P09630 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HOXC6P09630 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HOXC6P09630 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HOXC6P09630 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HOXC6P09630 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.15■■□□□ 1.3
HOXC6P09630 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.15■■□□□ 1.3
HOXC6P09630 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HOXC6P09630 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.15■■□□□ 1.3
HOXC6P09630 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
HOXC6P09630 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HOXC6P09630 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
HOXC6P09630 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
HOXC6P09630 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HOXC6P09630 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.15■■□□□ 1.3
HOXC6P09630 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.15■■□□□ 1.3
HOXC6P09630 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.15■■□□□ 1.3
HOXC6P09630 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.15■■□□□ 1.3
HOXC6P09630 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HOXC6P09630 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
HOXC6P09630 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.14■■□□□ 1.3
HOXC6P09630 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
HOXC6P09630 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
HOXC6P09630 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
HOXC6P09630 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.14■■□□□ 1.29
HOXC6P09630 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
HOXC6P09630 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
HOXC6P09630 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HOXC6P09630 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.14■■□□□ 1.29
HOXC6P09630 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.14■■□□□ 1.29
HOXC6P09630 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HOXC6P09630 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HOXC6P09630 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.14■■□□□ 1.29
HOXC6P09630 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.14■■□□□ 1.29
HOXC6P09630 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.14■■□□□ 1.29
HOXC6P09630 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HOXC6P09630 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
HOXC6P09630 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
HOXC6P09630 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.13■■□□□ 1.29
HOXC6P09630 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HOXC6P09630 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
HOXC6P09630 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.13■■□□□ 1.29
HOXC6P09630 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
HOXC6P09630 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
HOXC6P09630 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HOXC6P09630 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.13■■□□□ 1.29
HOXC6P09630 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
HOXC6P09630 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.13■■□□□ 1.29
HOXC6P09630 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
HOXC6P09630 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.13■■□□□ 1.29
HOXC6P09630 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.13■■□□□ 1.29
HOXC6P09630 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HOXC6P09630 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HOXC6P09630 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HOXC6P09630 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
HOXC6P09630 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
HOXC6P09630 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HOXC6P09630 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HOXC6P09630 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HOXC6P09630 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HOXC6P09630 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
HOXC6P09630 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
HOXC6P09630 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HOXC6P09630 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.12■■□□□ 1.29
HOXC6P09630 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.12■■□□□ 1.29
HOXC6P09630 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HOXC6P09630 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
HOXC6P09630 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.12■■□□□ 1.29
HOXC6P09630 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.12■■□□□ 1.29
HOXC6P09630 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.12■■□□□ 1.29
HOXC6P09630 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.12■■□□□ 1.29
HOXC6P09630 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
HOXC6P09630 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
HOXC6P09630 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
HOXC6P09630 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HOXC6P09630 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HOXC6P09630 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.11■■□□□ 1.29
HOXC6P09630 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HOXC6P09630 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
HOXC6P09630 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HOXC6P09630 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
HOXC6P09630 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HOXC6P09630 RCN1P1-201ENST00000400413 996 ntBASIC23.11■■□□□ 1.29
HOXC6P09630 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.11■■□□□ 1.29
HOXC6P09630 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HOXC6P09630 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HOXC6P09630 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.11■■□□□ 1.29
HOXC6P09630 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HOXC6P09630 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms