Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN1P07384 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN1P07384 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN1P07384 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20■□□□□ 0.79
CAPN1P07384 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20■□□□□ 0.79
CAPN1P07384 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20■□□□□ 0.79
CAPN1P07384 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CAPN1P07384 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN1P07384 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN1P07384 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CAPN1P07384 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN1P07384 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20■□□□□ 0.79
CAPN1P07384 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CAPN1P07384 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CAPN1P07384 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN1P07384 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN1P07384 AL355802.2-201ENST00000402069 882 ntBASIC20■□□□□ 0.79
CAPN1P07384 GUSBP6-202ENST00000438529 1198 ntBASIC20■□□□□ 0.79
CAPN1P07384 AC083906.2-201ENST00000511578 360 ntBASIC20■□□□□ 0.79
CAPN1P07384 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20■□□□□ 0.79
CAPN1P07384 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CAPN1P07384 AL121832.2-201ENST00000610979 668 ntBASIC20■□□□□ 0.79
CAPN1P07384 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN1P07384 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20■□□□□ 0.79
CAPN1P07384 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN1P07384 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CAPN1P07384 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
CAPN1P07384 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CAPN1P07384 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20■□□□□ 0.79
CAPN1P07384 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN1P07384 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CAPN1P07384 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.99■□□□□ 0.79
CAPN1P07384 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CAPN1P07384 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN1P07384 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN1P07384 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN1P07384 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.99■□□□□ 0.79
CAPN1P07384 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN1P07384 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.99■□□□□ 0.79
CAPN1P07384 SLC7A5P2-201ENST00000553010 536 ntBASIC19.99■□□□□ 0.79
CAPN1P07384 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN1P07384 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN1P07384 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN1P07384 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN1P07384 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.99■□□□□ 0.79
CAPN1P07384 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN1P07384 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN1P07384 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN1P07384 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN1P07384 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN1P07384 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN1P07384 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN1P07384 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.98■□□□□ 0.79
CAPN1P07384 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.98■□□□□ 0.79
CAPN1P07384 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CAPN1P07384 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN1P07384 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN1P07384 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN1P07384 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.98■□□□□ 0.79
CAPN1P07384 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN1P07384 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CAPN1P07384 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN1P07384 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.98■□□□□ 0.79
CAPN1P07384 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN1P07384 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CAPN1P07384 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN1P07384 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN1P07384 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CAPN1P07384 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN1P07384 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
CAPN1P07384 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN1P07384 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN1P07384 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CAPN1P07384 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN1P07384 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CAPN1P07384 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN1P07384 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN1P07384 TSPY6P-201ENST00000448518 926 ntBASIC19.97■□□□□ 0.79
CAPN1P07384 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.97■□□□□ 0.79
CAPN1P07384 AC142086.2-201ENST00000569753 217 ntBASIC19.97■□□□□ 0.79
CAPN1P07384 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.97■□□□□ 0.79
CAPN1P07384 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.97■□□□□ 0.79
CAPN1P07384 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CAPN1P07384 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CAPN1P07384 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN1P07384 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN1P07384 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN1P07384 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN1P07384 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.96■□□□□ 0.79
CAPN1P07384 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN1P07384 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN1P07384 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN1P07384 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN1P07384 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN1P07384 AC020907.5-201ENST00000624372 1936 ntBASIC19.96■□□□□ 0.79
CAPN1P07384 KRT16P2-201ENST00000414673 1423 ntBASIC19.96■□□□□ 0.79
CAPN1P07384 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CAPN1P07384 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.96■□□□□ 0.79
CAPN1P07384 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.96■□□□□ 0.79
CAPN1P07384 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms