Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 YGL069CYGL069C 465 nt1.66□□□□□ -2.14
RAD3P06839 FYV8YGR196C 2454 nt1.66□□□□□ -2.14
RAD3P06839 CRM1YGR218W 3255 nt1.65□□□□□ -2.14
RAD3P06839 YDL009CYDL009C 324 nt1.65□□□□□ -2.15
RAD3P06839 YDL062WYDL062W 426 nt1.65□□□□□ -2.15
RAD3P06839 CRD1YDL142C 852 nt1.65□□□□□ -2.15
RAD3P06839 RPI1YIL119C 1224 nt1.65□□□□□ -2.15
RAD3P06839 ATP15YPL271W 189 nt1.65□□□□□ -2.15
RAD3P06839 YJR039WYJR039W 3366 nt1.65□□□□□ -2.15
RAD3P06839 MSH6YDR097C 3729 nt1.64□□□□□ -2.15
RAD3P06839 RPH1YER169W 2391 nt1.64□□□□□ -2.15
RAD3P06839 YOR343W-BYOR343W-B 5313 nt1.64□□□□□ -2.15
RAD3P06839 PEP8YJL053W 1140 nt1.64□□□□□ -2.15
RAD3P06839 YMR254CYMR254C 309 nt1.64□□□□□ -2.15
RAD3P06839 YMR304C-AYMR304C-A 351 nt1.64□□□□□ -2.15
RAD3P06839 YLR419WYLR419W 4308 nt1.64□□□□□ -2.15
RAD3P06839 SPC110YDR356W 2835 nt1.64□□□□□ -2.15
RAD3P06839 SSK2YNR031C 4740 nt1.64□□□□□ -2.15
RAD3P06839 STB4YMR019W 2850 nt1.64□□□□□ -2.15
RAD3P06839 BRO1YPL084W 2535 nt1.64□□□□□ -2.15
RAD3P06839 CHS1YNL192W 3396 nt1.64□□□□□ -2.15
RAD3P06839 BTT1YDR252W 450 nt1.63□□□□□ -2.15
RAD3P06839 RAD6YGL058W 519 nt1.63□□□□□ -2.15
RAD3P06839 tQ(UUG)E2tQ(UUG)E2 72 nt1.63□□□□□ -2.15
RAD3P06839 YIL082WYIL082W 873 nt1.63□□□□□ -2.15
RAD3P06839 YJL127C-BYJL127C-B 159 nt1.63□□□□□ -2.15
RAD3P06839 ATP18YML081C-A 180 nt1.63□□□□□ -2.15
RAD3P06839 YMR052C-AYMR052C-A 366 nt1.63□□□□□ -2.15
RAD3P06839 MEI5YPL121C 669 nt1.63□□□□□ -2.15
RAD3P06839 YPR147CYPR147C 915 nt1.63□□□□□ -2.15
RAD3P06839 VPS35YJL154C 2835 nt1.63□□□□□ -2.15
RAD3P06839 POL5YEL055C 3069 nt1.62□□□□□ -2.15
RAD3P06839 SNO3YFL060C 669 nt1.62□□□□□ -2.15
RAD3P06839 RPL29YFR032C-A 180 nt1.62□□□□□ -2.15
RAD3P06839 GRX8YLR364W 330 nt1.62□□□□□ -2.15
RAD3P06839 SNO2YNL334C 669 nt1.62□□□□□ -2.15
RAD3P06839 APM3YBR288C 1452 nt1.62□□□□□ -2.15
RAD3P06839 SAC3YDR159W 3906 nt1.61□□□□□ -2.15
RAD3P06839 RBK1YCR036W 1002 nt1.61□□□□□ -2.15
RAD3P06839 DFG10YIL049W 762 nt1.61□□□□□ -2.15
RAD3P06839 BUD19YJL188C 309 nt1.61□□□□□ -2.15
RAD3P06839 TFC8YPL007C 1767 nt1.61□□□□□ -2.15
RAD3P06839 YJR087WYJR087W 351 nt1.6□□□□□ -2.15
RAD3P06839 YNL150WYNL150W 408 nt1.6□□□□□ -2.15
RAD3P06839 YOR146WYOR146W 306 nt1.6□□□□□ -2.15
RAD3P06839 CDC31YOR257W 486 nt1.6□□□□□ -2.15
RAD3P06839 CCH1YGR217W 6120 nt1.6□□□□□ -2.15
RAD3P06839 SEC63YOR254C 1992 nt1.59□□□□□ -2.15
RAD3P06839 snR9snR9 187 nt1.59□□□□□ -2.15
RAD3P06839 YFR009W-AYFR009W-A 258 nt1.59□□□□□ -2.15
RAD3P06839 SEN15YMR059W 387 nt1.59□□□□□ -2.15
RAD3P06839 CYB5YNL111C 363 nt1.59□□□□□ -2.15
RAD3P06839 REF2YDR195W 1602 nt1.58□□□□□ -2.16
RAD3P06839 SPE1YKL184W 1401 nt1.58□□□□□ -2.16
RAD3P06839 PLC1YPL268W 2610 nt1.58□□□□□ -2.16
RAD3P06839 ATP17YDR377W 306 nt1.58□□□□□ -2.16
RAD3P06839 YER038W-AYER038W-A 381 nt1.58□□□□□ -2.16
RAD3P06839 LAG1YHL003C 1236 nt1.58□□□□□ -2.16
RAD3P06839 YOR105WYOR105W 327 nt1.58□□□□□ -2.16
RAD3P06839 TBS1YBR150C 3285 nt1.58□□□□□ -2.16
RAD3P06839 MAD1YGL086W 2250 nt1.57□□□□□ -2.16
RAD3P06839 PAU3YCR104W 375 nt1.57□□□□□ -2.16
RAD3P06839 YDR042CYDR042C 603 nt1.57□□□□□ -2.16
RAD3P06839 TMA20YER007C-A 546 nt1.57□□□□□ -2.16
RAD3P06839 YHR054CYHR054C 1065 nt1.57□□□□□ -2.16
RAD3P06839 YOR394C-AYOR394C-A 168 nt1.57□□□□□ -2.16
RAD3P06839 SEY1YOR165W 2331 nt1.57□□□□□ -2.16
RAD3P06839 VMR1YHL035C 4779 nt1.57□□□□□ -2.16
RAD3P06839 DOT6YER088C 2013 nt1.56□□□□□ -2.16
RAD3P06839 RPL31AYDL075W 342 nt1.56□□□□□ -2.16
RAD3P06839 YGR228WYGR228W 345 nt1.56□□□□□ -2.16
RAD3P06839 HSK3YKL138C-A 210 nt1.56□□□□□ -2.16
RAD3P06839 ECM9YKR004C 1134 nt1.56□□□□□ -2.16
RAD3P06839 YLR031WYLR031W 561 nt1.56□□□□□ -2.16
RAD3P06839 YMR013C-AYMR013C-A 150 nt1.56□□□□□ -2.16
RAD3P06839 RIC1YLR039C 3171 nt1.55□□□□□ -2.16
RAD3P06839 DCP2YNL118C 2913 nt1.55□□□□□ -2.16
RAD3P06839 MZM1YDR493W 372 nt1.55□□□□□ -2.16
RAD3P06839 SCEIQ0160 708 nt1.55□□□□□ -2.16
RAD3P06839 TPM2YIL138C 486 nt1.55□□□□□ -2.16
RAD3P06839 BET4YJL031C 984 nt1.55□□□□□ -2.16
RAD3P06839 YMR230W-AYMR230W-A 189 nt1.55□□□□□ -2.16
RAD3P06839 YNL010WYNL010W 726 nt1.55□□□□□ -2.16
RAD3P06839 RPS7BYNL096C 573 nt1.55□□□□□ -2.16
RAD3P06839 YPR177CYPR177C 372 nt1.55□□□□□ -2.16
RAD3P06839 CDC27YBL084C 2277 nt1.55□□□□□ -2.16
RAD3P06839 LAA1YJL207C 6045 nt1.54□□□□□ -2.16
RAD3P06839 YDL187CYDL187C 330 nt1.54□□□□□ -2.16
RAD3P06839 PRP21YJL203W 843 nt1.54□□□□□ -2.16
RAD3P06839 RCN1YKL159C 636 nt1.54□□□□□ -2.16
RAD3P06839 ARV1YLR242C 966 nt1.54□□□□□ -2.16
RAD3P06839 NBP1YLR457C 960 nt1.54□□□□□ -2.16
RAD3P06839 YOR364WYOR364W 369 nt1.54□□□□□ -2.16
RAD3P06839 RRI2YOL117W 1938 nt1.54□□□□□ -2.16
RAD3P06839 YOR019WYOR019W 2193 nt1.54□□□□□ -2.16
RAD3P06839 HKR1YDR420W 5409 nt1.53□□□□□ -2.16
RAD3P06839 YFL002W-BYFL002W-B 1317 nt1.53□□□□□ -2.16
RAD3P06839 YGR161W-AYGR161W-A 1317 nt1.53□□□□□ -2.16
RAD3P06839 YGR283CYGR283C 1026 nt1.53□□□□□ -2.16
RAD3P06839 YIL102CYIL102C 306 nt1.53□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 43.1 ms