Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL1A1P02452 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC24.7■■□□□ 1.54
COL1A1P02452 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC24.7■■□□□ 1.54
COL1A1P02452 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
COL1A1P02452 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC24.7■■□□□ 1.54
COL1A1P02452 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC24.7■■□□□ 1.54
COL1A1P02452 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC24.7■■□□□ 1.54
COL1A1P02452 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL1A1P02452 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.69■■□□□ 1.54
COL1A1P02452 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC24.69■■□□□ 1.54
COL1A1P02452 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.69■■□□□ 1.54
COL1A1P02452 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL1A1P02452 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL1A1P02452 MDFI-202ENST00000373050 809 ntTSL 2 BASIC24.69■■□□□ 1.54
COL1A1P02452 AC012618.2-201ENST00000428058 849 ntBASIC24.69■■□□□ 1.54
COL1A1P02452 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.69■■□□□ 1.54
COL1A1P02452 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL1A1P02452 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL1A1P02452 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC24.69■■□□□ 1.54
COL1A1P02452 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC24.69■■□□□ 1.54
COL1A1P02452 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC24.69■■□□□ 1.54
COL1A1P02452 MIR2861-201ENST00000636310 90 ntBASIC24.69■■□□□ 1.54
COL1A1P02452 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
COL1A1P02452 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL1A1P02452 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL1A1P02452 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
COL1A1P02452 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.68■■□□□ 1.54
COL1A1P02452 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC24.68■■□□□ 1.54
COL1A1P02452 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
COL1A1P02452 POM121L13P-201ENST00000422362 380 ntBASIC24.68■■□□□ 1.54
COL1A1P02452 SNORA78-201ENST00000459373 127 ntBASIC24.68■■□□□ 1.54
COL1A1P02452 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
COL1A1P02452 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC24.68■■□□□ 1.54
COL1A1P02452 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.68■■□□□ 1.54
COL1A1P02452 STK25-205ENST00000405883 1904 ntTSL 2 BASIC24.68■■□□□ 1.54
COL1A1P02452 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A1P02452 LINC00565-201ENST00000562710 2331 ntBASIC24.67■■□□□ 1.54
COL1A1P02452 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A1P02452 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A1P02452 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
COL1A1P02452 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC24.67■■□□□ 1.54
COL1A1P02452 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
COL1A1P02452 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A1P02452 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A1P02452 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A1P02452 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A1P02452 GXYLT1P3-201ENST00000453058 1193 ntBASIC24.67■■□□□ 1.54
COL1A1P02452 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC24.67■■□□□ 1.54
COL1A1P02452 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A1P02452 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC24.67■■□□□ 1.54
COL1A1P02452 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC24.67■■□□□ 1.54
COL1A1P02452 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A1P02452 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A1P02452 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.67■■□□□ 1.54
COL1A1P02452 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A1P02452 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL1A1P02452 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.66■■□□□ 1.54
COL1A1P02452 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL1A1P02452 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL1A1P02452 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC24.66■■□□□ 1.54
COL1A1P02452 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL1A1P02452 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
COL1A1P02452 AC005829.2-201ENST00000571422 1056 ntBASIC24.66■■□□□ 1.54
COL1A1P02452 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL1A1P02452 SPIB-206ENST00000596074 847 ntTSL 2 BASIC24.66■■□□□ 1.54
COL1A1P02452 Z99916.2-201ENST00000604037 246 ntBASIC24.66■■□□□ 1.54
COL1A1P02452 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL1A1P02452 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL1A1P02452 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL1A1P02452 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.66■■□□□ 1.54
COL1A1P02452 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL1A1P02452 KRT8P36-201ENST00000489121 1440 ntBASIC24.66■■□□□ 1.54
COL1A1P02452 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL1A1P02452 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL1A1P02452 GGT1-206ENST00000404223 952 ntTSL 2 BASIC24.65■■□□□ 1.54
COL1A1P02452 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC24.65■■□□□ 1.54
COL1A1P02452 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL1A1P02452 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL1A1P02452 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.65■■□□□ 1.54
COL1A1P02452 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL1A1P02452 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL1A1P02452 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL1A1P02452 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL1A1P02452 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC24.65■■□□□ 1.54
COL1A1P02452 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
COL1A1P02452 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
COL1A1P02452 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
COL1A1P02452 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL1A1P02452 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
COL1A1P02452 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
COL1A1P02452 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
COL1A1P02452 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC24.64■■□□□ 1.54
COL1A1P02452 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL1A1P02452 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
COL1A1P02452 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL1A1P02452 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.64■■□□□ 1.53
COL1A1P02452 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
COL1A1P02452 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL1A1P02452 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.64■■□□□ 1.53
COL1A1P02452 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms