Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRNP200O75643 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.54■□□□□ 0.72
SNRNP200O75643 LSM12P1-201ENST00000411836 588 ntBASIC19.54■□□□□ 0.72
SNRNP200O75643 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.54■□□□□ 0.72
SNRNP200O75643 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRNP200O75643 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.54■□□□□ 0.72
SNRNP200O75643 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNRNP200O75643 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNRNP200O75643 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.54■□□□□ 0.72
SNRNP200O75643 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.54■□□□□ 0.72
SNRNP200O75643 AC097658.1-201ENST00000475555 843 ntBASIC19.54■□□□□ 0.72
SNRNP200O75643 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNRNP200O75643 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNRNP200O75643 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRNP200O75643 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRNP200O75643 AC121338.2-201ENST00000622535 1744 ntBASIC19.54■□□□□ 0.72
SNRNP200O75643 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP200O75643 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP200O75643 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP200O75643 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.53■□□□□ 0.72
SNRNP200O75643 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP200O75643 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP200O75643 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SNRNP200O75643 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP200O75643 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.53■□□□□ 0.72
SNRNP200O75643 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.53■□□□□ 0.72
SNRNP200O75643 PNMA6B-201ENST00000538162 1200 ntBASIC19.53■□□□□ 0.72
SNRNP200O75643 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP200O75643 AC060766.5-201ENST00000590539 871 ntBASIC19.53■□□□□ 0.72
SNRNP200O75643 AL589743.5-201ENST00000616611 1050 ntBASIC19.53■□□□□ 0.72
SNRNP200O75643 AC007225.1-201ENST00000566331 1836 ntBASIC19.53■□□□□ 0.72
SNRNP200O75643 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP200O75643 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.53■□□□□ 0.72
SNRNP200O75643 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP200O75643 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SNRNP200O75643 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.53■□□□□ 0.72
SNRNP200O75643 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP200O75643 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP200O75643 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP200O75643 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP200O75643 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.53■□□□□ 0.72
SNRNP200O75643 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SNRNP200O75643 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRNP200O75643 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNRNP200O75643 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRNP200O75643 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.52■□□□□ 0.72
SNRNP200O75643 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.52■□□□□ 0.72
SNRNP200O75643 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRNP200O75643 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRNP200O75643 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRNP200O75643 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SNRNP200O75643 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNRNP200O75643 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.52■□□□□ 0.72
SNRNP200O75643 AP005212.1-201ENST00000581547 1997 ntBASIC19.52■□□□□ 0.72
SNRNP200O75643 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNRNP200O75643 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRNP200O75643 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.52■□□□□ 0.72
SNRNP200O75643 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNRNP200O75643 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP200O75643 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP200O75643 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP200O75643 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SNRNP200O75643 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SNRNP200O75643 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.51■□□□□ 0.71
SNRNP200O75643 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.51■□□□□ 0.71
SNRNP200O75643 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.51■□□□□ 0.71
SNRNP200O75643 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.51■□□□□ 0.71
SNRNP200O75643 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP200O75643 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP200O75643 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP200O75643 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.51■□□□□ 0.71
SNRNP200O75643 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.51■□□□□ 0.71
SNRNP200O75643 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.51■□□□□ 0.71
SNRNP200O75643 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.51■□□□□ 0.71
SNRNP200O75643 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.51■□□□□ 0.71
SNRNP200O75643 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SNRNP200O75643 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNRNP200O75643 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNRNP200O75643 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SNRNP200O75643 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SNRNP200O75643 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNRNP200O75643 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.5■□□□□ 0.71
SNRNP200O75643 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNRNP200O75643 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNRNP200O75643 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.5■□□□□ 0.71
SNRNP200O75643 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNRNP200O75643 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.5■□□□□ 0.71
SNRNP200O75643 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNRNP200O75643 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNRNP200O75643 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.49■□□□□ 0.71
SNRNP200O75643 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
SNRNP200O75643 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SNRNP200O75643 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.49■□□□□ 0.71
SNRNP200O75643 AC008403.3-201ENST00000598924 454 ntBASIC19.49■□□□□ 0.71
SNRNP200O75643 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms