Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCMT2O60294 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCMT2O60294 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCMT2O60294 AC073314.1-201ENST00000568729 2216 ntBASIC19.51■□□□□ 0.71
LCMT2O60294 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCMT2O60294 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCMT2O60294 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LCMT2O60294 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.5■□□□□ 0.71
LCMT2O60294 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LCMT2O60294 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.5■□□□□ 0.71
LCMT2O60294 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LCMT2O60294 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LCMT2O60294 MIPEPP3-201ENST00000412105 444 ntBASIC19.5■□□□□ 0.71
LCMT2O60294 BX276092.2-201ENST00000417668 665 ntBASIC19.5■□□□□ 0.71
LCMT2O60294 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.5■□□□□ 0.71
LCMT2O60294 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.5■□□□□ 0.71
LCMT2O60294 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.5■□□□□ 0.71
LCMT2O60294 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
LCMT2O60294 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.5■□□□□ 0.71
LCMT2O60294 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.5■□□□□ 0.71
LCMT2O60294 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.5■□□□□ 0.71
LCMT2O60294 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.5■□□□□ 0.71
LCMT2O60294 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LCMT2O60294 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.5■□□□□ 0.71
LCMT2O60294 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
LCMT2O60294 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LCMT2O60294 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LCMT2O60294 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCMT2O60294 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LCMT2O60294 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCMT2O60294 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCMT2O60294 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCMT2O60294 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCMT2O60294 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LCMT2O60294 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCMT2O60294 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LCMT2O60294 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCMT2O60294 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LCMT2O60294 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.49■□□□□ 0.71
LCMT2O60294 HLA-L-209ENST00000420110 1011 ntBASIC19.49■□□□□ 0.71
LCMT2O60294 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.49■□□□□ 0.71
LCMT2O60294 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.49■□□□□ 0.71
LCMT2O60294 AC104771.1-201ENST00000603335 964 ntBASIC19.49■□□□□ 0.71
LCMT2O60294 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
LCMT2O60294 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.49■□□□□ 0.71
LCMT2O60294 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.49■□□□□ 0.71
LCMT2O60294 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCMT2O60294 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCMT2O60294 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.49■□□□□ 0.71
LCMT2O60294 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.48■□□□□ 0.71
LCMT2O60294 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.48■□□□□ 0.71
LCMT2O60294 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCMT2O60294 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LCMT2O60294 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
LCMT2O60294 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCMT2O60294 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
LCMT2O60294 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
LCMT2O60294 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCMT2O60294 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.48■□□□□ 0.71
LCMT2O60294 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.48■□□□□ 0.71
LCMT2O60294 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.48■□□□□ 0.71
LCMT2O60294 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.48■□□□□ 0.71
LCMT2O60294 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCMT2O60294 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LCMT2O60294 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCMT2O60294 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCMT2O60294 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LCMT2O60294 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCMT2O60294 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LCMT2O60294 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LCMT2O60294 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCMT2O60294 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LCMT2O60294 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LCMT2O60294 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 SLC29A4P1-201ENST00000398760 971 ntBASIC19.47■□□□□ 0.71
LCMT2O60294 PGM5P4-201ENST00000421970 445 ntBASIC19.47■□□□□ 0.71
LCMT2O60294 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.47■□□□□ 0.71
LCMT2O60294 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.47■□□□□ 0.71
LCMT2O60294 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 AC092667.1-201ENST00000434301 2586 ntBASIC19.47■□□□□ 0.71
LCMT2O60294 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.47■□□□□ 0.71
LCMT2O60294 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCMT2O60294 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.47■□□□□ 0.71
LCMT2O60294 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.47■□□□□ 0.71
LCMT2O60294 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.47■□□□□ 0.71
LCMT2O60294 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms