Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH7O60245 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDH7O60245 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH7O60245 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH7O60245 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH7O60245 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH7O60245 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH7O60245 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH7O60245 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH7O60245 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH7O60245 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDH7O60245 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCDH7O60245 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH7O60245 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH7O60245 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH7O60245 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH7O60245 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDH7O60245 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH7O60245 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDH7O60245 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH7O60245 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PCDH7O60245 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDH7O60245 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH7O60245 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH7O60245 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH7O60245 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH7O60245 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCDH7O60245 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
PCDH7O60245 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PCDH7O60245 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH7O60245 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH7O60245 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDH7O60245 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH7O60245 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH7O60245 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH7O60245 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH7O60245 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH7O60245 AL162377.1-201ENST00000618844 1793 ntBASIC19.43■□□□□ 0.7
PCDH7O60245 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH7O60245 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.43■□□□□ 0.7
PCDH7O60245 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.43■□□□□ 0.7
PCDH7O60245 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH7O60245 FAM21FP-204ENST00000608637 956 ntBASIC19.43■□□□□ 0.7
PCDH7O60245 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH7O60245 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDH7O60245 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDH7O60245 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH7O60245 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDH7O60245 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH7O60245 AL391422.3-201ENST00000603791 2761 ntBASIC19.43■□□□□ 0.7
PCDH7O60245 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH7O60245 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH7O60245 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH7O60245 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH7O60245 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PCDH7O60245 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH7O60245 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH7O60245 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH7O60245 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PCDH7O60245 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH7O60245 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH7O60245 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDH7O60245 AC016769.1-201ENST00000409132 1010 ntBASIC19.42■□□□□ 0.7
PCDH7O60245 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH7O60245 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDH7O60245 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.42■□□□□ 0.7
PCDH7O60245 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.42■□□□□ 0.7
PCDH7O60245 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH7O60245 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDH7O60245 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH7O60245 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH7O60245 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
PCDH7O60245 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH7O60245 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH7O60245 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH7O60245 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PCDH7O60245 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCDH7O60245 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH7O60245 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH7O60245 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH7O60245 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH7O60245 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PCDH7O60245 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH7O60245 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH7O60245 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.41■□□□□ 0.7
PCDH7O60245 AL591742.1-201ENST00000604433 565 ntBASIC19.41■□□□□ 0.7
PCDH7O60245 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH7O60245 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH7O60245 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH7O60245 KRT8P36-201ENST00000489121 1440 ntBASIC19.41■□□□□ 0.7
PCDH7O60245 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH7O60245 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH7O60245 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
PCDH7O60245 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH7O60245 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH7O60245 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH7O60245 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH7O60245 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH7O60245 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDH7O60245 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms