Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.67■□□□□ 0.42
XRCC2O43543 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.67■□□□□ 0.42
XRCC2O43543 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
XRCC2O43543 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC2O43543 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
XRCC2O43543 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC2O43543 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC2O43543 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC2O43543 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.67■□□□□ 0.42
XRCC2O43543 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
XRCC2O43543 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.67■□□□□ 0.42
XRCC2O43543 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
XRCC2O43543 AC007322.4-201ENST00000509611 723 ntBASIC17.67■□□□□ 0.42
XRCC2O43543 AL162412.1-201ENST00000567129 965 ntBASIC17.67■□□□□ 0.42
XRCC2O43543 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC2O43543 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC2O43543 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.67■□□□□ 0.42
XRCC2O43543 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC2O43543 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC2O43543 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC2O43543 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.67■□□□□ 0.42
XRCC2O43543 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
XRCC2O43543 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC2O43543 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
XRCC2O43543 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC2O43543 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
XRCC2O43543 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC2O43543 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.66■□□□□ 0.42
XRCC2O43543 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC2O43543 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC2O43543 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.66■□□□□ 0.42
XRCC2O43543 PGM5P4-201ENST00000421970 445 ntBASIC17.66■□□□□ 0.42
XRCC2O43543 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.66■□□□□ 0.42
XRCC2O43543 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.66■□□□□ 0.42
XRCC2O43543 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.66■□□□□ 0.42
XRCC2O43543 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
XRCC2O43543 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC2O43543 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC2O43543 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC2O43543 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.66■□□□□ 0.42
XRCC2O43543 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC2O43543 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC2O43543 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
XRCC2O43543 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC2O43543 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
XRCC2O43543 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.65■□□□□ 0.42
XRCC2O43543 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.65■□□□□ 0.42
XRCC2O43543 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC2O43543 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC2O43543 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC2O43543 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC2O43543 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC2O43543 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC2O43543 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC2O43543 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC2O43543 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.65■□□□□ 0.42
XRCC2O43543 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.65■□□□□ 0.42
XRCC2O43543 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
XRCC2O43543 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC2O43543 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.65■□□□□ 0.42
XRCC2O43543 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.65■□□□□ 0.42
XRCC2O43543 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC2O43543 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
XRCC2O43543 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC2O43543 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC2O43543 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.65■□□□□ 0.42
XRCC2O43543 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC2O43543 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
XRCC2O43543 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
XRCC2O43543 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.64■□□□□ 0.42
XRCC2O43543 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC2O43543 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC2O43543 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC2O43543 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.64■□□□□ 0.41
XRCC2O43543 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC2O43543 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.64■□□□□ 0.41
XRCC2O43543 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.64■□□□□ 0.41
XRCC2O43543 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC2O43543 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC2O43543 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC2O43543 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC2O43543 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC2O43543 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.64■□□□□ 0.41
XRCC2O43543 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
XRCC2O43543 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
XRCC2O43543 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC2O43543 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC2O43543 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.63■□□□□ 0.41
XRCC2O43543 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
XRCC2O43543 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC2O43543 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.63■□□□□ 0.41
XRCC2O43543 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC2O43543 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC2O43543 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC2O43543 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC2O43543 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.63■□□□□ 0.41
XRCC2O43543 AL162430.1-201ENST00000480705 870 ntBASIC17.63■□□□□ 0.41
XRCC2O43543 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC2O43543 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC2O43543 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms