Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNQ3O43525 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNQ3O43525 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNQ3O43525 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
KCNQ3O43525 GGT1-206ENST00000404223 952 ntTSL 2 BASIC26.3■■□□□ 1.8
KCNQ3O43525 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC26.3■■□□□ 1.8
KCNQ3O43525 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNQ3O43525 MTDHP1-201ENST00000605323 784 ntBASIC26.3■■□□□ 1.8
KCNQ3O43525 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNQ3O43525 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
KCNQ3O43525 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNQ3O43525 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNQ3O43525 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
KCNQ3O43525 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNQ3O43525 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNQ3O43525 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC26.3■■□□□ 1.8
KCNQ3O43525 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNQ3O43525 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC26.3■■□□□ 1.8
KCNQ3O43525 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNQ3O43525 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
KCNQ3O43525 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNQ3O43525 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC26.29■■□□□ 1.8
KCNQ3O43525 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
KCNQ3O43525 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KCNQ3O43525 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KCNQ3O43525 PGM5P4-201ENST00000421970 445 ntBASIC26.29■■□□□ 1.8
KCNQ3O43525 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC26.29■■□□□ 1.8
KCNQ3O43525 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
KCNQ3O43525 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KCNQ3O43525 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.29■■□□□ 1.8
KCNQ3O43525 SPIB-206ENST00000596074 847 ntTSL 2 BASIC26.29■■□□□ 1.8
KCNQ3O43525 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KCNQ3O43525 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KCNQ3O43525 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
KCNQ3O43525 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC26.29■■□□□ 1.8
KCNQ3O43525 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.29■■□□□ 1.8
KCNQ3O43525 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KCNQ3O43525 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC26.29■■□□□ 1.8
KCNQ3O43525 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
KCNQ3O43525 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KCNQ3O43525 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC26.28■■□□□ 1.8
KCNQ3O43525 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KCNQ3O43525 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
KCNQ3O43525 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC26.28■■□□□ 1.8
KCNQ3O43525 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC26.28■■□□□ 1.8
KCNQ3O43525 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC26.28■■□□□ 1.8
KCNQ3O43525 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC26.28■■□□□ 1.8
KCNQ3O43525 FAM197Y4-202ENST00000622692 608 ntBASIC26.28■■□□□ 1.8
KCNQ3O43525 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC26.28■■□□□ 1.8
KCNQ3O43525 MIR2861-201ENST00000636310 90 ntBASIC26.28■■□□□ 1.8
KCNQ3O43525 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC26.28■■□□□ 1.8
KCNQ3O43525 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
KCNQ3O43525 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KCNQ3O43525 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
KCNQ3O43525 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
KCNQ3O43525 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
KCNQ3O43525 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KCNQ3O43525 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC26.28■■□□□ 1.8
KCNQ3O43525 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
KCNQ3O43525 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
KCNQ3O43525 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
KCNQ3O43525 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
KCNQ3O43525 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
KCNQ3O43525 SERF2-207ENST00000409614 582 ntTSL 2 BASIC26.27■■□□□ 1.8
KCNQ3O43525 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
KCNQ3O43525 TK2-204ENST00000525974 1178 ntTSL 2 BASIC26.27■■□□□ 1.8
KCNQ3O43525 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
KCNQ3O43525 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.27■■□□□ 1.8
KCNQ3O43525 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC26.27■■□□□ 1.8
KCNQ3O43525 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC26.27■■□□□ 1.8
KCNQ3O43525 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
KCNQ3O43525 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
KCNQ3O43525 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
KCNQ3O43525 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
KCNQ3O43525 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC26.26■■□□□ 1.79
KCNQ3O43525 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
KCNQ3O43525 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
KCNQ3O43525 KRT8P36-201ENST00000489121 1440 ntBASIC26.26■■□□□ 1.79
KCNQ3O43525 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
KCNQ3O43525 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
KCNQ3O43525 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC26.26■■□□□ 1.79
KCNQ3O43525 ARL16-209ENST00000573715 763 ntTSL 3 BASIC26.26■■□□□ 1.79
KCNQ3O43525 ARL16-211ENST00000576135 694 ntTSL 3 BASIC26.26■■□□□ 1.79
KCNQ3O43525 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC26.26■■□□□ 1.79
KCNQ3O43525 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC26.26■■□□□ 1.79
KCNQ3O43525 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
KCNQ3O43525 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
KCNQ3O43525 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
KCNQ3O43525 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
KCNQ3O43525 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
KCNQ3O43525 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
KCNQ3O43525 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
KCNQ3O43525 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.25■■□□□ 1.79
KCNQ3O43525 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
KCNQ3O43525 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC26.25■■□□□ 1.79
KCNQ3O43525 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.25■■□□□ 1.79
KCNQ3O43525 AL023875.1-201ENST00000640777 796 ntBASIC26.25■■□□□ 1.79
KCNQ3O43525 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
KCNQ3O43525 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
KCNQ3O43525 AC121338.2-201ENST00000622535 1744 ntBASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms