Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-8O15522 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-8O15522 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-8O15522 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-8O15522 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-8O15522 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-8O15522 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
NKX2-8O15522 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
NKX2-8O15522 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NKX2-8O15522 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NKX2-8O15522 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NKX2-8O15522 RCN1P1-201ENST00000400413 996 ntBASIC18.89■□□□□ 0.61
NKX2-8O15522 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.89■□□□□ 0.61
NKX2-8O15522 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.89■□□□□ 0.61
NKX2-8O15522 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.89■□□□□ 0.61
NKX2-8O15522 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NKX2-8O15522 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NKX2-8O15522 AC012306.2-201ENST00000609350 630 ntBASIC18.89■□□□□ 0.61
NKX2-8O15522 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.89■□□□□ 0.61
NKX2-8O15522 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.89■□□□□ 0.61
NKX2-8O15522 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX2-8O15522 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX2-8O15522 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX2-8O15522 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.89■□□□□ 0.61
NKX2-8O15522 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX2-8O15522 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX2-8O15522 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.89■□□□□ 0.61
NKX2-8O15522 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-8O15522 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-8O15522 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-8O15522 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
NKX2-8O15522 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-8O15522 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-8O15522 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-8O15522 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-8O15522 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.88■□□□□ 0.61
NKX2-8O15522 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.88■□□□□ 0.61
NKX2-8O15522 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NKX2-8O15522 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.88■□□□□ 0.61
NKX2-8O15522 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-8O15522 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.88■□□□□ 0.61
NKX2-8O15522 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-8O15522 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-8O15522 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-8O15522 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NKX2-8O15522 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-8O15522 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-8O15522 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NKX2-8O15522 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.88■□□□□ 0.61
NKX2-8O15522 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.88■□□□□ 0.61
NKX2-8O15522 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-8O15522 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-8O15522 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-8O15522 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-8O15522 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.87■□□□□ 0.61
NKX2-8O15522 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-8O15522 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-8O15522 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-8O15522 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-8O15522 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
NKX2-8O15522 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-8O15522 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.87■□□□□ 0.61
NKX2-8O15522 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
NKX2-8O15522 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-8O15522 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.87■□□□□ 0.61
NKX2-8O15522 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.87■□□□□ 0.61
NKX2-8O15522 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.87■□□□□ 0.61
NKX2-8O15522 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-8O15522 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-8O15522 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.87■□□□□ 0.61
NKX2-8O15522 AC026471.5-201ENST00000615068 467 ntBASIC18.87■□□□□ 0.61
NKX2-8O15522 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.87■□□□□ 0.61
NKX2-8O15522 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-8O15522 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-8O15522 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-8O15522 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.86■□□□□ 0.61
NKX2-8O15522 AC242852.2-201ENST00000615738 1807 ntBASIC18.86■□□□□ 0.61
NKX2-8O15522 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-8O15522 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-8O15522 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-8O15522 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-8O15522 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-8O15522 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-8O15522 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-8O15522 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-8O15522 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.86■□□□□ 0.61
NKX2-8O15522 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NKX2-8O15522 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.86■□□□□ 0.61
NKX2-8O15522 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.86■□□□□ 0.61
NKX2-8O15522 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.85■□□□□ 0.61
NKX2-8O15522 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-8O15522 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.85■□□□□ 0.61
NKX2-8O15522 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.85■□□□□ 0.61
NKX2-8O15522 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-8O15522 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-8O15522 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-8O15522 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.85■□□□□ 0.61
NKX2-8O15522 AP003071.4-201ENST00000562276 1284 ntBASIC18.85■□□□□ 0.61
NKX2-8O15522 AL353708.3-201ENST00000610272 989 ntBASIC18.85■□□□□ 0.61
NKX2-8O15522 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms