Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
FOXN1O15353 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
FOXN1O15353 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.39■■□□□ 1.5
FOXN1O15353 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.39■■□□□ 1.5
FOXN1O15353 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
FOXN1O15353 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
FOXN1O15353 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC24.39■■□□□ 1.49
FOXN1O15353 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
FOXN1O15353 AC026471.5-201ENST00000615068 467 ntBASIC24.39■■□□□ 1.49
FOXN1O15353 AC006557.6-201ENST00000623071 864 ntBASIC24.39■■□□□ 1.49
FOXN1O15353 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
FOXN1O15353 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
FOXN1O15353 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.38■■□□□ 1.49
FOXN1O15353 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.38■■□□□ 1.49
FOXN1O15353 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
FOXN1O15353 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.38■■□□□ 1.49
FOXN1O15353 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
FOXN1O15353 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
FOXN1O15353 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
FOXN1O15353 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
FOXN1O15353 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
FOXN1O15353 NMU-205ENST00000511469 756 ntTSL 3 BASIC24.38■■□□□ 1.49
FOXN1O15353 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC24.38■■□□□ 1.49
FOXN1O15353 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC24.38■■□□□ 1.49
FOXN1O15353 AP003071.4-201ENST00000562276 1284 ntBASIC24.38■■□□□ 1.49
FOXN1O15353 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
FOXN1O15353 AC008175.2-201ENST00000612840 297 ntBASIC24.38■■□□□ 1.49
FOXN1O15353 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
FOXN1O15353 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
FOXN1O15353 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
FOXN1O15353 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
FOXN1O15353 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
FOXN1O15353 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
FOXN1O15353 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
FOXN1O15353 AC239809.2-201ENST00000415381 517 ntBASIC24.37■■□□□ 1.49
FOXN1O15353 AC026396.1-201ENST00000419388 421 ntBASIC24.37■■□□□ 1.49
FOXN1O15353 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC24.37■■□□□ 1.49
FOXN1O15353 RBM42-202ENST00000586618 771 ntTSL 3 BASIC24.37■■□□□ 1.49
FOXN1O15353 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.37■■□□□ 1.49
FOXN1O15353 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.37■■□□□ 1.49
FOXN1O15353 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
FOXN1O15353 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
FOXN1O15353 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
FOXN1O15353 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
FOXN1O15353 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
FOXN1O15353 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
FOXN1O15353 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.37■■□□□ 1.49
FOXN1O15353 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
FOXN1O15353 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
FOXN1O15353 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
FOXN1O15353 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
FOXN1O15353 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
FOXN1O15353 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
FOXN1O15353 AC113347.1-201ENST00000413321 391 ntBASIC24.36■■□□□ 1.49
FOXN1O15353 UPK3BP1-201ENST00000428678 509 ntBASIC24.36■■□□□ 1.49
FOXN1O15353 DUX4L26-201ENST00000489078 1255 ntBASIC24.36■■□□□ 1.49
FOXN1O15353 METTL23-204ENST00000586752 904 ntTSL 2 BASIC24.36■■□□□ 1.49
FOXN1O15353 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC24.36■■□□□ 1.49
FOXN1O15353 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC24.36■■□□□ 1.49
FOXN1O15353 AC110285.5-201ENST00000611501 352 ntBASIC24.36■■□□□ 1.49
FOXN1O15353 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC24.36■■□□□ 1.49
FOXN1O15353 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
FOXN1O15353 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC24.36■■□□□ 1.49
FOXN1O15353 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.36■■□□□ 1.49
FOXN1O15353 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
FOXN1O15353 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
FOXN1O15353 AC026310.3-201ENST00000625186 2373 ntBASIC24.36■■□□□ 1.49
FOXN1O15353 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
FOXN1O15353 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
FOXN1O15353 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
FOXN1O15353 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
FOXN1O15353 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
FOXN1O15353 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
FOXN1O15353 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.35■■□□□ 1.49
FOXN1O15353 RARRES2P10-201ENST00000564312 460 ntBASIC24.35■■□□□ 1.49
FOXN1O15353 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC24.35■■□□□ 1.49
FOXN1O15353 AC243732.1-201ENST00000612648 864 ntBASIC24.35■■□□□ 1.49
FOXN1O15353 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC24.35■■□□□ 1.49
FOXN1O15353 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
FOXN1O15353 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
FOXN1O15353 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
FOXN1O15353 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.35■■□□□ 1.49
FOXN1O15353 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
FOXN1O15353 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
FOXN1O15353 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
FOXN1O15353 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.34■■□□□ 1.49
FOXN1O15353 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
FOXN1O15353 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
FOXN1O15353 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
FOXN1O15353 AP004607.7-201ENST00000527152 1677 ntBASIC24.34■■□□□ 1.49
FOXN1O15353 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
FOXN1O15353 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.34■■□□□ 1.49
FOXN1O15353 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.34■■□□□ 1.49
FOXN1O15353 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
FOXN1O15353 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC24.34■■□□□ 1.49
FOXN1O15353 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
FOXN1O15353 AC026471.6-201ENST00000622954 1905 ntBASIC24.33■■□□□ 1.49
FOXN1O15353 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
FOXN1O15353 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
FOXN1O15353 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms